Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- peroxisome 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022166.1-P | Field mustard | cytosol | 46.77 | 99.57 |
| CDY43107 | Canola | cytosol, nucleus, peroxisome | 97.78 | 98.98 |
| AT3G16560.1 | Thale cress | cytosol, nucleus, peroxisome | 89.92 | 90.47 |
| VIT_05s0020g01460.t01 | Wine grape | cytosol, peroxisome, plastid | 65.12 | 64.21 |
| GSMUA_Achr10P... | Banana | cytosol | 44.76 | 62.54 |
| KRH50856 | Soybean | cytosol, nucleus, peroxisome | 63.91 | 60.96 |
| KRH02249 | Soybean | cytosol, nucleus, peroxisome | 64.11 | 60.69 |
| PGSC0003DMT400011807 | Potato | nucleus | 60.08 | 60.08 |
| KRH37115 | Soybean | cytosol, nucleus, peroxisome | 49.19 | 59.66 |
| PGSC0003DMT400029441 | Potato | cytosol, nucleus, peroxisome | 58.67 | 55.85 |
| Solyc01g066870.2.1 | Tomato | cytosol, nucleus, peroxisome | 34.07 | 53.31 |
| Os04t0403701-01 | Rice | cytosol, nucleus, peroxisome | 55.04 | 52.5 |
| Solyc12g099600.1.1 | Tomato | plasma membrane | 60.48 | 52.17 |
| Zm00001d025323_P004 | Maize | cytosol, peroxisome, plastid | 54.23 | 51.63 |
| EES12087 | Sorghum | cytosol | 54.23 | 51.63 |
| HORVU2Hr1G071850.2 | Barley | nucleus | 53.63 | 51.25 |
| TraesCS2B01G307000.1 | Wheat | nucleus | 53.43 | 51.06 |
| TraesCS2A01G290500.1 | Wheat | nucleus | 53.23 | 50.87 |
| Zm00001d000124_P003 | Maize | cytosol, peroxisome, plastid | 53.23 | 50.67 |
| TraesCS2D01G288400.1 | Wheat | nucleus | 53.02 | 48.26 |
| CDY40354 | Canola | cytosol | 20.77 | 42.74 |
| CDY71703 | Canola | cytosol | 14.11 | 35.0 |
| CDY71801 | Canola | cytosol | 31.25 | 28.44 |
| CDY71973 | Canola | cytosol, nucleus, peroxisome | 30.44 | 28.44 |
| CDY12086 | Canola | cytosol, mitochondrion, nucleus | 21.77 | 28.42 |
| CDY15623 | Canola | cytosol, mitochondrion, nucleus, peroxisome | 33.27 | 28.4 |
| CDY57256 | Canola | cytosol, nucleus, peroxisome | 33.06 | 28.08 |
| CDX95140 | Canola | cytosol, mitochondrion, nucleus | 34.88 | 27.9 |
| CDX90277 | Canola | cytosol, mitochondrion, nucleus | 21.37 | 27.89 |
| CDX76124 | Canola | mitochondrion | 20.97 | 27.81 |
| CDY02904 | Canola | mitochondrion | 20.97 | 27.81 |
| CDY04862 | Canola | cytosol, mitochondrion, plastid | 20.16 | 27.78 |
| CDY06718 | Canola | mitochondrion, plastid | 35.28 | 27.73 |
| CDY70696 | Canola | extracellular, peroxisome | 17.94 | 27.47 |
| CDY62569 | Canola | nucleus | 33.87 | 27.36 |
| CDY16313 | Canola | extracellular | 20.77 | 27.32 |
| CDX73725 | Canola | vacuole | 20.77 | 27.32 |
| CDY41610 | Canola | nucleus | 32.66 | 27.27 |
| CDX80837 | Canola | cytosol, mitochondrion | 19.96 | 27.2 |
| CDY44706 | Canola | nucleus | 32.46 | 27.2 |
| CDY42159 | Canola | cytosol | 20.77 | 27.18 |
| CDY08420 | Canola | cytosol, mitochondrion, plastid | 20.77 | 27.18 |
| CDY11224 | Canola | cytosol | 19.56 | 27.17 |
| CDX70348 | Canola | cytosol, mitochondrion | 19.76 | 27.0 |
| CDY10428 | Canola | mitochondrion | 19.76 | 27.0 |
| CDY33283 | Canola | plastid | 20.77 | 26.96 |
| CDY54807 | Canola | nucleus, peroxisome, plastid | 21.17 | 26.92 |
| CDY52665 | Canola | cytosol | 20.56 | 26.91 |
| CDY68192 | Canola | mitochondrion, nucleus, plastid | 30.65 | 26.9 |
| CDY51441 | Canola | mitochondrion | 20.97 | 26.87 |
| CDX73413 | Canola | mitochondrion | 20.97 | 26.87 |
| CDY55405 | Canola | cytosol, nucleus, plastid | 19.96 | 26.83 |
| CDY59038 | Canola | plastid | 30.85 | 26.7 |
| CDX70071 | Canola | cytosol, mitochondrion | 20.56 | 26.63 |
| CDX98953 | Canola | cytosol, mitochondrion | 20.56 | 26.63 |
| CDY50535 | Canola | cytosol, mitochondrion, plastid | 20.77 | 26.61 |
| CDY05001 | Canola | cytosol, mitochondrion | 20.77 | 26.34 |
| CDY14069 | Canola | cytosol, mitochondrion | 20.56 | 26.09 |
| CDX72438 | Canola | mitochondrion | 19.56 | 25.94 |
| CDX75902 | Canola | plastid | 19.35 | 25.46 |
| CDY49385 | Canola | mitochondrion | 19.15 | 25.4 |
| CDY39026 | Canola | cytosol, plastid, vacuole | 19.15 | 25.13 |
| CDY34992 | Canola | cytosol, plastid, vacuole | 19.15 | 25.13 |
| CDY28332 | Canola | mitochondrion | 19.35 | 25.0 |
| CDY51944 | Canola | mitochondrion | 19.35 | 24.94 |
| CDX84217 | Canola | nucleus, plastid | 33.06 | 24.74 |
| CDY07928 | Canola | nucleus | 32.66 | 24.47 |
| CDY31682 | Canola | nucleus, plastid | 32.66 | 24.36 |
| CDX73980 | Canola | nucleus | 32.46 | 24.17 |
| CDY29015 | Canola | cytosol | 15.12 | 20.83 |
| CDY41568 | Canola | cytosol, nucleus, peroxisome | 35.48 | 20.68 |
| CDX78002 | Canola | vacuole | 20.77 | 20.64 |
| CDX80059 | Canola | cytosol, nucleus, peroxisome | 35.28 | 20.59 |
| CDY51276 | Canola | mitochondrion | 3.43 | 20.48 |
| CDY40818 | Canola | mitochondrion | 5.04 | 19.84 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.2.3 | Gene3D:3.60.40.10 | GO:A0A078DUG6 | EnsemblPlants:CDX92079 |
| ProteinID:CDX92079 | ProteinID:CDX92079.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004722 | GO:GO:0006464 |
| GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 |
| EnsemblPlantsGene:GSBRNA2T00153763001 | InterPro:IPR001932 | InterPro:IPR036457 | PFAM:PF00481 | InterPro:PP2C | InterPro:PPM-type_dom_sf |
| InterPro:PPM-type_phosphatase_dom | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF538 | SMART:SM00332 | SUPFAM:SSF81606 |
| UniParc:UPI0004EDCEE3 | SEG:seg | : | : | : | : |
Description
BnaA05g23280D
Coordinates
chrLK031871:-:72935..75639
Molecular Weight (calculated)
53798.1 Da
IEP (calculated)
4.735
GRAVY (calculated)
-0.098
Length
496 amino acids
Sequence
(BLAST)
(BLAST)
001: MQQETLSDPY GEIEISFGYQ CNNNNNNNNN NKKTIGIPED AIVPDSRGVL AGFRLQKTSS FSCLSGAALS GNPTLANTNI CNGVIGSEIL PSLDSPKSFR
101: KVPSSPALSK LDILSPSLHG SMASLSCSPS PPEPESCFLT SMSSPSSSLN EGFVLSAMEV QVAGGAAGED RVQAVCSEEN GWLFCAIYDG FNGRDAADFL
201: ACTLYESIVF HLQLLDHQMK THQDVDDGGV SVIVDSSSSD LFRQGVLDCL NRALLQAEND FLRMVEQEME ERPDLVSVGS CVLVTLLVGK DLYIMNLGDS
301: RAVLATYNGN KKLQAVQLTE DHTVDNEIEE ARLLGEHLDD PKIVIGGKIK GKLKVTRALG VGYLKKEKLN DALMGILRVR NLLSPPYVSV EPSMRVHKIT
401: ESDHFVIVAS DGLFDFFSNE EAIELVHGFI ASNPCGDPAK FLLERLVAKA AARVGFTLEE LLNVPAGRKR RYHDDVTVMV ITLGTDQRTS KASTFV
101: KVPSSPALSK LDILSPSLHG SMASLSCSPS PPEPESCFLT SMSSPSSSLN EGFVLSAMEV QVAGGAAGED RVQAVCSEEN GWLFCAIYDG FNGRDAADFL
201: ACTLYESIVF HLQLLDHQMK THQDVDDGGV SVIVDSSSSD LFRQGVLDCL NRALLQAEND FLRMVEQEME ERPDLVSVGS CVLVTLLVGK DLYIMNLGDS
301: RAVLATYNGN KKLQAVQLTE DHTVDNEIEE ARLLGEHLDD PKIVIGGKIK GKLKVTRALG VGYLKKEKLN DALMGILRVR NLLSPPYVSV EPSMRVHKIT
401: ESDHFVIVAS DGLFDFFSNE EAIELVHGFI ASNPCGDPAK FLLERLVAKA AARVGFTLEE LLNVPAGRKR RYHDDVTVMV ITLGTDQRTS KASTFV
001: MQEGTDPYGE IEISFGYQCN NKKIGIPEDK IADGREVLGG FRLQKTSSFS CLSGAALSGN PTLANTNICN GVIGSEILPS LDSPKSFRKV PSSPALSKLD
101: ILSPSLHGSM VSLSCSSSTS PSPPEPESCY LTSMSSPSSV NEGFLLSAME VQVAGGAAGE DRVQAVCSEE NGWLFCAIYD GFNGRDAADF LACTLYESIV
201: FHLQLLDRQM KQTKSDDDGE KLELLSNISN VDYSSTDLFR QGVLDCLNRA LFQAETDFLR MVEQEMEERP DLVSVGSCVL VTLLVGKDLY VLNLGDSRAV
301: LATYNGNKKL QAVQLTEDHT VDNEVEEARL LSEHLDDPKI VIGGKIKGKL KVTRALGVGY LKKEKLNDAL MGILRVRNLL SPPYVSVEPS MRVHKITESD
401: HFVIVASDGL FDFFSNEEAI GLVHSFVSSN PSGDPAKFLL ERLVAKAAAR AGFTLEELTN VPAGRRRRYH DDVTIMVITL GTDQRTSKAS TFV
101: ILSPSLHGSM VSLSCSSSTS PSPPEPESCY LTSMSSPSSV NEGFLLSAME VQVAGGAAGE DRVQAVCSEE NGWLFCAIYD GFNGRDAADF LACTLYESIV
201: FHLQLLDRQM KQTKSDDDGE KLELLSNISN VDYSSTDLFR QGVLDCLNRA LFQAETDFLR MVEQEMEERP DLVSVGSCVL VTLLVGKDLY VLNLGDSRAV
301: LATYNGNKKL QAVQLTEDHT VDNEVEEARL LSEHLDDPKI VIGGKIKGKL KVTRALGVGY LKKEKLNDAL MGILRVRNLL SPPYVSVEPS MRVHKITESD
401: HFVIVASDGL FDFFSNEEAI GLVHSFVSSN PSGDPAKFLL ERLVAKAAAR AGFTLEELTN VPAGRRRRYH DDVTIMVITL GTDQRTSKAS TFV
Arabidopsis Description
Protein phosphatase 2C family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VFN3]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.