Factsheet for Solyc12g099600.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 3
vacuole 2
nucleus 1
extracellular 1
endoplasmic reticulum 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	vacuole
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400011807	Potato	nucleus	84.0	97.38
Solyc01g066870.2.1	Tomato	cytosol, nucleus, peroxisome	38.78	70.35
VIT_05s0020g01460.t01	Wine grape	cytosol, peroxisome, plastid	59.83	68.39
Bra022166.1-P	Field mustard	cytosol	27.3	67.38
KRH37115	Soybean	cytosol, nucleus, peroxisome	44.35	62.35
GSMUA_Achr10P...	Banana	cytosol	38.26	61.97
KRH02249	Soybean	cytosol, nucleus, peroxisome	56.35	61.83
KRH50856	Soybean	cytosol, nucleus, peroxisome	55.83	61.73
AT3G16560.1	Thale cress	cytosol, nucleus, peroxisome	52.35	61.05
CDY43107	Canola	cytosol, nucleus, peroxisome	51.83	60.82
CDX92079	Canola	cytosol, nucleus, peroxisome	52.17	60.48
Os04t0403701-01	Rice	cytosol, nucleus, peroxisome	47.83	52.88
HORVU2Hr1G071850.2	Barley	nucleus	47.48	52.6
TraesCS2B01G307000.1	Wheat	nucleus	47.48	52.6
EES12087	Sorghum	cytosol	47.65	52.59
TraesCS2A01G290500.1	Wheat	nucleus	47.3	52.41
Zm00001d000124_P003	Maize	cytosol, peroxisome, plastid	47.48	52.4
Zm00001d025323_P004	Maize	cytosol, peroxisome, plastid	47.13	52.02
TraesCS2D01G288400.1	Wheat	nucleus	47.3	49.91
Solyc10g055650.1.1	Tomato	cytosol	16.87	28.61
Solyc01g107300.2.1	Tomato	cytosol	10.78	27.07
Solyc10g086490.1.1	Tomato	cytosol	27.65	26.68
Solyc09g007080.2.1	Tomato	cytosol	17.22	26.19
Solyc10g049630.1.1	Tomato	mitochondrion, nucleus	17.22	26.05
Solyc10g084410.1.1	Tomato	mitochondrion	16.87	25.8
Solyc02g092750.2.1	Tomato	cytosol	16.35	25.68
Solyc09g010780.2.1	Tomato	cytosol	27.83	25.68
Solyc05g055980.2.1	Tomato	cytosol	13.91	25.48
Solyc03g033340.2.1	Tomato	mitochondrion	17.39	25.19
Solyc02g083420.2.1	Tomato	mitochondrion	17.04	25.13
Solyc01g111730.2.1	Tomato	cytosol, mitochondrion, plastid	16.7	24.74
Solyc06g076100.2.1	Tomato	nucleus	29.04	23.59
Solyc01g107310.2.1	Tomato	mitochondrion	7.48	23.24
Solyc10g078810.1.1	Tomato	cytosol	17.22	22.6
Solyc06g065920.2.1	Tomato	nucleus	14.61	22.46
Solyc08g007000.2.1	Tomato	nucleus	29.74	21.89
Solyc08g077150.2.1	Tomato	nucleus	30.09	21.73
Solyc10g078820.1.1	Tomato	mitochondrion	17.22	21.52
Solyc10g078800.1.1	Tomato	mitochondrion	16.35	7.16

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.3	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0005575	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932
InterPro:IPR036457	UniProt:K4DHY1	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF309	SMART:SM00332	SUPFAM:SSF81606	EnsemblPlantsGene:Solyc12g099600.1
EnsemblPlants:Solyc12g099600.1.1	TMHMM:TMhelix	UniParc:UPI000276A854	SEG:seg	:	:

Description

No Description!

Coordinates

chr12:+:66689349..66693763

Molecular Weight (calculated)

63298.5 Da

IEP (calculated)

6.035

GRAVY (calculated)

-0.062

Length

575 amino acids

Sequence
(BLAST)

001: MNFDFFSLSI NVIHRNFLQS SRPIFVLFFF PFNKRFFTIQ NIRNFFSFLI VPFQLLSVFL IWVLGFLALR IQEKVEAQMM GGQSKSDSGG QIKISFGYHC
101: NNSTDDSGEE SDGIDVRPGS KLRRANSSFS CLSGAALSAN ATLANTNICN GLFGAEILPA LDSPTSFRRI PSSPSFSKLD LLTSSFQSSL SNLSCSPSSP
201: SELAEDNSSS LRSTSAPSRC ESFLNATEVK IAGGAAGEDR VQAVCSEEND SLFCGIYDGF NGRDAADFLA GTLYETIRHY LGLLDCELER ESKVSDRVGF
301: YGLPYLEVEK SCPSFNQRVL NSLELALIQA ENDFLHMVEQ EMDNRPDLVS IGSCVLVVLL LGKNMYVLNA GDSRAVLATY GEGVGANSDG RLQAVQLTVS
401: HTVDDESERI QLLKNHPEDP STIVGGKVKG KLKVTRALGV GYLKKKSMND ALMGILRVRN LVSPPYVTVQ PSRTVHEISS SDHFVVLGSD GLFDFFNNDD
501: VVMLVHSYIQ RYPFGDPAKF LLEQLVMRAA DCAGFSKEEL MSIPAGRRRK YHDDVTVMVI ILGMNKRTSK ASTRL

Best Arabidopsis Sequence Match ( AT3G16560.1 )
(BLAST)

001: MQEGTDPYGE IEISFGYQCN NKKIGIPEDK IADGREVLGG FRLQKTSSFS CLSGAALSGN PTLANTNICN GVIGSEILPS LDSPKSFRKV PSSPALSKLD
101: ILSPSLHGSM VSLSCSSSTS PSPPEPESCY LTSMSSPSSV NEGFLLSAME VQVAGGAAGE DRVQAVCSEE NGWLFCAIYD GFNGRDAADF LACTLYESIV
201: FHLQLLDRQM KQTKSDDDGE KLELLSNISN VDYSSTDLFR QGVLDCLNRA LFQAETDFLR MVEQEMEERP DLVSVGSCVL VTLLVGKDLY VLNLGDSRAV
301: LATYNGNKKL QAVQLTEDHT VDNEVEEARL LSEHLDDPKI VIGGKIKGKL KVTRALGVGY LKKEKLNDAL MGILRVRNLL SPPYVSVEPS MRVHKITESD
401: HFVIVASDGL FDFFSNEEAI GLVHSFVSSN PSGDPAKFLL ERLVAKAAAR AGFTLEELTN VPAGRRRRYH DDVTIMVITL GTDQRTSKAS TFV

Arabidopsis Description

Protein phosphatase 2C family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VFN3]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.