Factsheet for Solyc10g078820.1.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
peroxisome 1
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400029770	Potato	mitochondrion	79.13	85.45
Solyc10g078810.1.1	Tomato	cytosol	79.35	83.33
VIT_08s0007g06510.t01	Wine grape	mitochondrion	48.04	56.67
GSMUA_Achr8P13470_001	Banana	mitochondrion	45.87	55.24
KRH38102	Soybean	mitochondrion	45.87	54.81
KRG95384	Soybean	mitochondrion	45.87	53.96
Os02t0685600-01	Rice	mitochondrion, plasma membrane	45.22	53.75
Bra009224.1-P	Field mustard	cytosol, mitochondrion	40.22	53.62
TraesCS2D01G456600.2	Wheat	mitochondrion	44.78	52.82
KRH71850	Soybean	mitochondrion	41.96	52.73
KXG30997	Sorghum	mitochondrion	44.35	52.58
TraesCS2B01G478400.2	Wheat	cytosol, mitochondrion, peroxisome, plastid	44.57	52.56
TraesCS2A01G456300.2	Wheat	cytosol, mitochondrion, peroxisome, plastid	44.57	52.56
KXG26992	Sorghum	cytosol, mitochondrion	44.57	52.16
HORVU2Hr1G104630.4	Barley	cytosol, mitochondrion, nucleus, peroxisome	44.13	52.05
AT5G06750.3	Thale cress	cytosol, mitochondrion	43.48	50.89
Bra028720.1-P	Field mustard	mitochondrion	42.17	50.52
Solyc10g055650.1.1	Tomato	cytosol	36.3	49.26
Solyc02g092750.2.1	Tomato	cytosol	37.39	46.99
Solyc01g107300.2.1	Tomato	cytosol	22.83	45.85
Solyc01g111730.2.1	Tomato	cytosol, mitochondrion, plastid	38.26	45.36
Solyc10g084410.1.1	Tomato	mitochondrion	36.96	45.21
Solyc03g033340.2.1	Tomato	mitochondrion	37.83	43.83
Solyc02g083420.2.1	Tomato	mitochondrion	36.74	43.33
Solyc10g049630.1.1	Tomato	mitochondrion, nucleus	35.65	43.16
Solyc09g007080.2.1	Tomato	cytosol	35.22	42.86
CDY40818	Canola	mitochondrion	11.52	42.06
Solyc05g055980.2.1	Tomato	cytosol	28.48	41.72
Solyc01g107310.2.1	Tomato	mitochondrion	16.74	41.62
Solyc06g065920.2.1	Tomato	nucleus	33.04	40.64
CDY51276	Canola	mitochondrion	6.74	37.35
Solyc01g066870.2.1	Tomato	cytosol, nucleus, peroxisome	19.13	27.76
Solyc10g078800.1.1	Tomato	mitochondrion	78.7	27.59
Solyc10g086490.1.1	Tomato	cytosol	22.83	17.62
Solyc09g010780.2.1	Tomato	cytosol	23.7	17.5
Solyc12g099600.1.1	Tomato	plasma membrane	21.52	17.22
Solyc06g076100.2.1	Tomato	nucleus	23.91	15.54
Solyc08g007000.2.1	Tomato	nucleus	23.7	13.96
Solyc08g077150.2.1	Tomato	nucleus	24.13	13.94
Zm00001d044834_P001	Maize	golgi	8.91	11.14

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872
InterPro:IPR001932	InterPro:IPR036457	UniProt:K4D2C3	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF239
SMART:SM00332	SUPFAM:SSF81606	EnsemblPlantsGene:Solyc10g078820.1	EnsemblPlants:Solyc10g078820.1.1	UniParc:UPI000276A3E9	SEG:seg

Description

No Description!

Coordinates

chr10:-:60509368..60511848

Molecular Weight (calculated)

51213.0 Da

IEP (calculated)

4.746

GRAVY (calculated)

-0.422

Length

460 amino acids

Sequence
(BLAST)

001: MVSWLDRTVS ACCQPLGRYI GLSSSEDGVL GGEDYPLLWY RDLEKHSCGE FSFAVVQANQ VCEDYGHVEP GREGTFVGVY DGHGGLDASR FACDNLSRHL
101: ITLAREKGTI DKEVLNNAFA ATEDGFLSIV EREFHDDPEI ASTGSCCLVG VIWKRRLYVA NLGDCRAVLG QTGIFNRIFA KQLTNDHNVR IKEVRDELRA
201: LHPDDPNIVT YVRRTWRVKS IIQVTRAIGD AFLKKPEFAI GAIPLKRPVL RADPSFCSRN LQPCDKFVIF ASDGLWDLLS NQEAVKIVHA YPRQGIARRL
301: VLSALNVAAR ARKLKCDDLM NYDKGVRRAF HDDITVVVIF IDHEKLNDKL TAPGMSVRGY VDTHRPSDFN IEQEVATETE HTETESTETE STGTEPTGTE
401: PTETEATGIE RSETEPTKTE PTGTEPTETE CSETEHTETE PTGTEVAETE PTKTELTVTV

Best Arabidopsis Sequence Match ( AT5G06750.1 )
(BLAST)

001: MFSWLARMAL FCLRPMRRYG RMNRDDDDDD DHDGDSSSSG DSLLWSRELE RHSFGDFSIA VVQANEVIED HSQVETGNGA VFVGVYDGHG GPEASRYISD
101: HLFSHLMRVS RERSCISEEA LRAAFSATEE GFLTLVRRTC GLKPLIAAVG SCCLVGVIWK GTLLIANVGD SRAVLGSMGS NNNRSNKIVA EQLTSDHNAA
201: LEEVRQELRS LHPDDSHIVV LKHGVWRIKG IIQVSRSIGD AYLKRPEFSL DPSFPRFHLA EELQRPVLSA EPCVYTRVLQ TSDKFVIFAS DGLWEQMTNQ
301: QAVEIVNKHP RPGIARRLVR RAITIAAKKR EMNYDDLKKV ERGVRRFFHD DITVVVIFID NELLMVEKAT VPELSIKGFS HTVGPSKFSI FLS

Arabidopsis Description

Probable protein phosphatase 2C 68 [Source:UniProtKB/Swiss-Prot;Acc:Q84JD5]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.