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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:
  • plastid 2
  • mitochondrion 6
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, plasma membrane
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
MultiLoc:mitochondrion
Plant-mPloc:plastid
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:mitochondrion
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d017643_P001 Maize mitochondrion 85.53 85.53
KXG30997 Sorghum mitochondrion 84.75 84.54
GSMUA_Achr8P13470_001 Banana mitochondrion 75.71 76.7
VIT_08s0007g06510.t01 Wine grape mitochondrion 73.64 73.08
KRH38102 Soybean mitochondrion 68.22 68.57
KRH71850 Soybean mitochondrion 64.6 68.31
AT5G06750.3 Thale cress cytosol, mitochondrion 68.22 67.18
CDY14069 Canola cytosol, mitochondrion 67.44 66.75
CDY05001 Canola cytosol, mitochondrion 67.18 66.5
CDX98953 Canola cytosol, mitochondrion 65.37 66.06
Bra028720.1-P Field mustard mitochondrion 65.37 65.89
CDX70071 Canola cytosol, mitochondrion 64.86 65.54
Bra009224.1-P Field mustard cytosol, mitochondrion 57.11 64.06
Os01t0976700-01 Rice mitochondrion 54.52 56.12
Os03t0137200-01 Rice mitochondrion 55.04 53.38
Os12t0580900-01 Rice mitochondrion 54.01 53.32
Os10t0544900-01 Rice plastid 53.75 52.93
PGSC0003DMT400029771 Potato cytosol, mitochondrion, peroxisome 52.71 52.85
Os06t0717800-01 Rice mitochondrion 52.97 52.3
Os03t0761100-01 Rice mitochondrion 50.65 51.58
Os03t0832400-01 Rice plasma membrane 51.16 51.3
PGSC0003DMT400029763 Potato cytosol, mitochondrion 50.13 49.74
PGSC0003DMT400029765 Potato mitochondrion 51.42 48.66
Os03t0207400-01 Rice mitochondrion 47.55 46.94
Solyc10g078810.1.1 Tomato cytosol 52.71 46.58
Os07t0114000-01 Rice mitochondrion 44.96 46.15
Solyc10g078820.1.1 Tomato mitochondrion 53.75 45.22
PGSC0003DMT400029770 Potato mitochondrion 47.55 43.19
PGSC0003DMT400029776 Potato cytosol 18.35 38.59
Os04t0403701-01 Rice cytosol, nucleus, peroxisome 25.06 18.65
Os02t0690500-01 Rice plastid 27.65 17.95
Os03t0821300-01 Rice mitochondrion, nucleus, peroxisome, plastid 28.94 17.53
Os03t0275100-02 Rice cytosol, peroxisome, plastid 26.87 16.48
Solyc10g078800.1.1 Tomato mitochondrion 50.9 15.02
Os05t0111800-00 Rice mitochondrion, peroxisome, plastid 19.64 12.24
Os03t0372500-03 Rice cytosol, mitochondrion, nucleus, plastid 28.42 11.26
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:18.4.24.2.4Gene3D:3.60.40.10EntrezGene:4330350EMBL:AK111835
ProteinID:BAD07571.1ProteinID:BAF09680.1ProteinID:BAS80331.1GO:GO:0003674GO:GO:0003824GO:GO:0004721
GO:GO:0004722GO:GO:0005488GO:GO:0006464GO:GO:0006470GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016787GO:GO:0019538GO:GO:0043169GO:GO:0046872InterPro:IPR001932
InterPro:IPR036457EnsemblPlantsGene:Os02g0685600EnsemblPlants:Os02t0685600-01PFAM:PF00481InterPro:PP2CInterPro:PP2C_BS
InterPro:PPM-type_dom_sfInterPro:PPM-type_phosphatase_domScanProsite:PS01032PFscan:PS51746PANTHER:PTHR13832PANTHER:PTHR13832:SF239
UniProt:Q6ZHC8SMART:SM00332SUPFAM:SSF81606UniParc:UPI000023672ARefSeq:XP_015625262.1SEG:seg
Description
protein phosphatase 2C25, protein phosphatase 2C 25, protein phosphatase 36Similar to Protein phosphatase 2C-like. (Os02t0685600-01)
Coordinates
chr2:-:28079035..28081773
Molecular Weight (calculated)
43014.5 Da
IEP (calculated)
8.481
GRAVY (calculated)
-0.129
Length
387 amino acids
Sequence
(BLAST)
001: MFSWLLRIAS ACLGPARRYA RTRKDEDGGD NGGGVADGLL WSRDLGRHAA GEFSFAVVQA NEALEDHSQV ETGSAATFVG VYDGHGGADA ARFISDHLFA
101: HLIRLARESE TVSEEVVRGA FSATEEGFLT LVRRTQFLKP MIAAVGSCCL VGIIWRGVLY VANLGDSRAV VGYLGRTNKI TAEQITRDHN ACKEEVRQEL
201: ISRHPDDSQI VVLKHGVWRI KGIIQVSRTI GDAYLKRREF ALDPSITRFR LSEPLRRPVL TAEPSICTRV LSLQDQFVIF ASDGLWEHLT NQQAVDIVYK
301: NPRAGIAKRL VNTALKEAAR KREMRFVDLK KVEKGVRRFF HDDITVVVVY IDHELLQEKN VSVPELSVRG FVDSVGPSRI SGFDAIS
Best Arabidopsis Sequence Match ( AT5G06750.1 )
(BLAST)
001: MFSWLARMAL FCLRPMRRYG RMNRDDDDDD DHDGDSSSSG DSLLWSRELE RHSFGDFSIA VVQANEVIED HSQVETGNGA VFVGVYDGHG GPEASRYISD
101: HLFSHLMRVS RERSCISEEA LRAAFSATEE GFLTLVRRTC GLKPLIAAVG SCCLVGVIWK GTLLIANVGD SRAVLGSMGS NNNRSNKIVA EQLTSDHNAA
201: LEEVRQELRS LHPDDSHIVV LKHGVWRIKG IIQVSRSIGD AYLKRPEFSL DPSFPRFHLA EELQRPVLSA EPCVYTRVLQ TSDKFVIFAS DGLWEQMTNQ
301: QAVEIVNKHP RPGIARRLVR RAITIAAKKR EMNYDDLKKV ERGVRRFFHD DITVVVIFID NELLMVEKAT VPELSIKGFS HTVGPSKFSI FLS
Arabidopsis Description
Probable protein phosphatase 2C 68 [Source:UniProtKB/Swiss-Prot;Acc:Q84JD5]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.