Subcellular Localization
min:
: max
Winner_takes_all: cytosol, mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 3
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX70071 | Canola | cytosol, mitochondrion | 95.3 | 95.3 |
| AT5G06750.3 | Thale cress | cytosol, mitochondrion | 86.68 | 84.48 |
| CDY14069 | Canola | cytosol, mitochondrion | 85.12 | 83.38 |
| CDY05001 | Canola | cytosol, mitochondrion | 84.6 | 82.86 |
| VIT_08s0007g06510.t01 | Wine grape | mitochondrion | 70.23 | 68.97 |
| GSMUA_Achr8P13470_001 | Banana | mitochondrion | 66.58 | 66.75 |
| Zm00001d017643_P001 | Maize | mitochondrion | 67.36 | 66.67 |
| Os02t0685600-01 | Rice | mitochondrion, plasma membrane | 66.06 | 65.37 |
| KRG95384 | Soybean | mitochondrion | 65.8 | 64.45 |
| KXG30997 | Sorghum | mitochondrion | 65.01 | 64.18 |
| TraesCS2D01G456600.2 | Wheat | mitochondrion | 63.19 | 62.05 |
| TraesCS2B01G478400.2 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 63.19 | 62.05 |
| HORVU2Hr1G104630.4 | Barley | cytosol, mitochondrion, nucleus, peroxisome | 63.19 | 62.05 |
| TraesCS2A01G456300.2 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 62.92 | 61.79 |
| Zm00001d002542_P001 | Maize | cytosol, mitochondrion | 61.36 | 59.95 |
| KXG26992 | Sorghum | cytosol, mitochondrion | 61.1 | 59.54 |
| CDX73725 | Canola | vacuole | 50.65 | 51.46 |
| CDX90277 | Canola | cytosol, mitochondrion, nucleus | 50.65 | 51.05 |
| CDY12086 | Canola | cytosol, mitochondrion, nucleus | 50.65 | 51.05 |
| CDY16313 | Canola | extracellular | 49.87 | 50.66 |
| CDY08420 | Canola | cytosol, mitochondrion, plastid | 49.87 | 50.4 |
| CDY33283 | Canola | plastid | 50.13 | 50.26 |
| CDY02904 | Canola | mitochondrion | 48.83 | 50.0 |
| CDY52665 | Canola | cytosol | 49.35 | 49.87 |
| CDY42159 | Canola | cytosol | 49.09 | 49.6 |
| CDX76124 | Canola | mitochondrion | 48.3 | 49.47 |
| CDY50535 | Canola | cytosol, mitochondrion, plastid | 49.35 | 48.84 |
| CDY49385 | Canola | mitochondrion | 47.52 | 48.66 |
| CDX75902 | Canola | plastid | 47.78 | 48.54 |
| CDX72438 | Canola | mitochondrion | 47.26 | 48.4 |
| CDY54807 | Canola | nucleus, peroxisome, plastid | 49.09 | 48.21 |
| CDY34992 | Canola | cytosol, plastid, vacuole | 47.26 | 47.88 |
| CDY39026 | Canola | cytosol, plastid, vacuole | 47.26 | 47.88 |
| CDX73413 | Canola | mitochondrion | 48.3 | 47.8 |
| CDY51441 | Canola | mitochondrion | 48.3 | 47.8 |
| CDY11224 | Canola | cytosol | 44.39 | 47.62 |
| CDX70348 | Canola | cytosol, mitochondrion | 44.39 | 46.83 |
| CDY10428 | Canola | mitochondrion | 44.39 | 46.83 |
| CDY04862 | Canola | cytosol, mitochondrion, plastid | 43.86 | 46.67 |
| CDY55405 | Canola | cytosol, nucleus, plastid | 44.65 | 46.34 |
| CDY70696 | Canola | extracellular, peroxisome | 39.16 | 46.3 |
| CDY28332 | Canola | mitochondrion | 46.21 | 46.09 |
| CDY51944 | Canola | mitochondrion | 46.21 | 45.97 |
| CDX80837 | Canola | cytosol, mitochondrion | 43.08 | 45.33 |
| CDY29015 | Canola | cytosol | 38.38 | 40.83 |
| CDY40818 | Canola | mitochondrion | 13.05 | 39.68 |
| CDX78002 | Canola | vacuole | 51.17 | 39.28 |
| CDY51276 | Canola | mitochondrion | 8.36 | 38.55 |
| CDY40354 | Canola | cytosol | 18.28 | 29.05 |
| CDY71703 | Canola | cytosol | 12.01 | 23.0 |
| CDY43107 | Canola | cytosol, nucleus, peroxisome | 26.89 | 21.02 |
| CDX92079 | Canola | cytosol, nucleus, peroxisome | 26.63 | 20.56 |
| CDY71973 | Canola | cytosol, nucleus, peroxisome | 26.63 | 19.21 |
| CDY57256 | Canola | cytosol, nucleus, peroxisome | 29.24 | 19.18 |
| CDY15623 | Canola | cytosol, mitochondrion, nucleus, peroxisome | 28.98 | 19.11 |
| CDY71801 | Canola | cytosol | 25.85 | 18.17 |
| CDX95140 | Canola | cytosol, mitochondrion, nucleus | 28.46 | 17.58 |
| CDY06718 | Canola | mitochondrion, plastid | 28.46 | 17.27 |
| CDY44706 | Canola | nucleus | 25.85 | 16.72 |
| CDY41610 | Canola | nucleus | 25.59 | 16.5 |
| CDY62569 | Canola | nucleus | 26.37 | 16.45 |
| CDY68192 | Canola | mitochondrion, nucleus, plastid | 24.02 | 16.28 |
| CDY59038 | Canola | plastid | 24.28 | 16.23 |
| CDY31682 | Canola | nucleus, plastid | 26.37 | 15.19 |
| CDX84217 | Canola | nucleus, plastid | 26.11 | 15.08 |
| CDX73980 | Canola | nucleus | 25.59 | 14.71 |
| CDY07928 | Canola | nucleus | 25.33 | 14.65 |
| CDX80059 | Canola | cytosol, nucleus, peroxisome | 27.15 | 12.24 |
| CDY41568 | Canola | cytosol, nucleus, peroxisome | 27.15 | 12.22 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.2.4 | Gene3D:3.60.40.10 | GO:A0A078EHZ5 | EnsemblPlants:CDX98953 |
| ProteinID:CDX98953 | ProteinID:CDX98953.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004722 |
| GO:GO:0005488 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0043169 | EnsemblPlantsGene:GSBRNA2T00107068001 | InterPro:IPR001932 | InterPro:IPR036457 |
| PFAM:PF00481 | InterPro:PP2C | InterPro:PP2C_BS | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | ScanProsite:PS01032 |
| PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF239 | SMART:SM00332 | SUPFAM:SSF81606 | UniParc:UPI0004EDEA6D |
| SEG:seg | : | : | : | : | : |
Description
BnaC09g48820D
Coordinates
chrLK031907:-:783562..785219
Molecular Weight (calculated)
42983.8 Da
IEP (calculated)
9.350
GRAVY (calculated)
-0.207
Length
383 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSLVRMVL FCLRPVRRYA LMIKDDEDDS DGHDDSLLWS RELQRHSLGD FSMAVVQGNE VIEDHSQVET GKGAVFVGVY DGHGGPEASR YISDHLFAHL
101: MRNSRERGVI TEETLRAAFS ATERGFLTLV RRTRGLKPLI AAAGSCCLVG VIRKGTLLIA NLGDSRAVLG YMSRSNKIVA EQLTSDHNAA QEEVRQELRS
201: LHPDDARIVV HKQGVWRIKG IIQVSRSIGD AYLKRPEFSL GPSFPRFHLP EGLQRPVLSA EPCVYTRVLQ TSDKFVIFAS DGLWEHVTNQ QAVEIVNKHP
301: RPGIARRLVR RAMNIAAKKR DITYDDLKKV ERGVRRFFHD DITVAVIFID NELLMVEKAT VPELSIKGFS HTVGPSKFSL LFS
101: MRNSRERGVI TEETLRAAFS ATERGFLTLV RRTRGLKPLI AAAGSCCLVG VIRKGTLLIA NLGDSRAVLG YMSRSNKIVA EQLTSDHNAA QEEVRQELRS
201: LHPDDARIVV HKQGVWRIKG IIQVSRSIGD AYLKRPEFSL GPSFPRFHLP EGLQRPVLSA EPCVYTRVLQ TSDKFVIFAS DGLWEHVTNQ QAVEIVNKHP
301: RPGIARRLVR RAMNIAAKKR DITYDDLKKV ERGVRRFFHD DITVAVIFID NELLMVEKAT VPELSIKGFS HTVGPSKFSL LFS
001: MFSWLARMAL FCLRPMRRYG RMNRDDDDDD DHDGDSSSSG DSLLWSRELE RHSFGDFSIA VVQANEVIED HSQVETGNGA VFVGVYDGHG GPEASRYISD
101: HLFSHLMRVS RERSCISEEA LRAAFSATEE GFLTLVRRTC GLKPLIAAVG SCCLVGVIWK GTLLIANVGD SRAVLGSMGS NNNRSNKIVA EQLTSDHNAA
201: LEEVRQELRS LHPDDSHIVV LKHGVWRIKG IIQVSRSIGD AYLKRPEFSL DPSFPRFHLA EELQRPVLSA EPCVYTRVLQ TSDKFVIFAS DGLWEQMTNQ
301: QAVEIVNKHP RPGIARRLVR RAITIAAKKR EMNYDDLKKV ERGVRRFFHD DITVVVIFID NELLMVEKAT VPELSIKGFS HTVGPSKFSI FLS
101: HLFSHLMRVS RERSCISEEA LRAAFSATEE GFLTLVRRTC GLKPLIAAVG SCCLVGVIWK GTLLIANVGD SRAVLGSMGS NNNRSNKIVA EQLTSDHNAA
201: LEEVRQELRS LHPDDSHIVV LKHGVWRIKG IIQVSRSIGD AYLKRPEFSL DPSFPRFHLA EELQRPVLSA EPCVYTRVLQ TSDKFVIFAS DGLWEQMTNQ
301: QAVEIVNKHP RPGIARRLVR RAITIAAKKR EMNYDDLKKV ERGVRRFFHD DITVVVIFID NELLMVEKAT VPELSIKGFS HTVGPSKFSI FLS
Arabidopsis Description
Probable protein phosphatase 2C 68 [Source:UniProtKB/Swiss-Prot;Acc:Q84JD5]
SUBAcon: [cytosol,mitochondrion]
SUBAcon: [cytosol,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.