CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH38102	Soybean	mitochondrion	75.45	76.62
KRH71850	Soybean	mitochondrion	70.08	74.86
AT5G06750.3	Thale cress	cytosol, mitochondrion	67.01	66.67
CDX70071	Canola	cytosol, mitochondrion	64.45	65.8
CDX98953	Canola	cytosol, mitochondrion	64.45	65.8
CDY05001	Canola	cytosol, mitochondrion	64.96	64.96
CDY14069	Canola	cytosol, mitochondrion	64.71	64.71
Bra028720.1-P	Field mustard	mitochondrion	62.92	64.06
Bra009224.1-P	Field mustard	cytosol, mitochondrion	56.27	63.77
PGSC0003DMT400029771	Potato	cytosol, mitochondrion, peroxisome	53.45	54.15
KRH50715	Soybean	mitochondrion, peroxisome, plastid	49.87	52.14
KRH32367	Soybean	cytosol	49.36	52.02
KRH19775	Soybean	cytosol	49.1	51.75
KRH02370	Soybean	cytosol, extracellular, plastid	49.36	51.47
PGSC0003DMT400029763	Potato	cytosol, mitochondrion	51.15	51.28
KRH11926	Soybean	cytosol	48.59	51.08
KRH36962	Soybean	cytosol	48.85	51.07
KRH36281	Soybean	mitochondrion	50.64	50.9
KRH07984	Soybean	mitochondrion	50.38	50.0
KRG93033	Soybean	mitochondrion	49.62	50.0
KRH67612	Soybean	cytosol	45.52	49.86
KRH69725	Soybean	mitochondrion	50.13	49.75
KRH36089	Soybean	cytosol	50.38	49.62
KRG90665	Soybean	mitochondrion	50.13	49.37
PGSC0003DMT400029765	Potato	mitochondrion	51.41	49.14
KRH35699	Soybean	mitochondrion	47.31	48.94
KRG95894	Soybean	cytosol	46.29	48.92
KRG91074	Soybean	cytosol, mitochondrion	46.55	48.79
KRH28403	Soybean	cytosol	45.78	47.73
KRH77072	Soybean	cytosol	45.78	47.48
Solyc10g078810.1.1	Tomato	cytosol	51.92	46.35
Solyc10g078820.1.1	Tomato	mitochondrion	53.96	45.87
PGSC0003DMT400029770	Potato	mitochondrion	47.83	43.9
PGSC0003DMT400029776	Potato	cytosol	17.65	37.5
KRH37115	Soybean	cytosol, nucleus, peroxisome	21.74	20.78
KRH50856	Soybean	cytosol, nucleus, peroxisome	25.58	19.23
KRH49093	Soybean	cytosol, mitochondrion, nucleus, plastid	29.41	19.1
KRG99924	Soybean	cytosol, mitochondrion, nucleus, plastid	29.16	19.1
KRH02249	Soybean	cytosol, nucleus, peroxisome	25.32	18.89
KRH58222	Soybean	cytosol, nucleus, peroxisome	28.39	15.95
KRH28277	Soybean	plastid	29.67	15.7
KRH24796	Soybean	nucleus	28.64	15.56
KRH29800	Soybean	cytosol, nucleus, plastid	28.64	15.56
KRH04317	Soybean	cytosol, nucleus, plastid	27.88	15.55
KRH77217	Soybean	plastid	29.41	15.27
Solyc10g078800.1.1	Tomato	mitochondrion	51.15	15.24
KRH68360	Soybean	cytosol, nucleus, peroxisome	27.62	12.18
KRG96628	Soybean	cytosol, nucleus, peroxisome	27.37	12.06

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100806476	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	EMBL:ACUP02012105
ncoils:Coil	EnsemblPlantsGene:GLYMA_19G147800	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722
GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	UniProt:I1N985	InterPro:IPR001932
InterPro:IPR036457	EnsemblPlants:KRG95384	ProteinID:KRG95384	ProteinID:KRG95384.1	PFAM:PF00481	InterPro:PP2C
InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832
PANTHER:PTHR13832:SF239	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000233EB9F	SEG:seg	:

Description

hypothetical protein

Coordinates

chr19:+:40846219..40850347

Molecular Weight (calculated)

44153.1 Da

IEP (calculated)

7.906

GRAVY (calculated)

-0.278

Length

391 amino acids

Sequence
(BLAST)

001: MFSWLARLVS SCLRPVRRYA RMSKDGDDDD DGVDESTSSV EDSLLWRRDL LKHSCGEFSF AVVQANEVIE DHSQVEIGSD AIFVGVYDGH GGPEASRFVR
101: DHLFQHLMRI AQDNGNISEE ILRGAVTATE DGFMKLVHRS YMIKPLIASI GSCCLVGVIW KGTLYIANLG DSRAVVGSLG RSNKIIAEQL TREHNACREE
201: IRQELRSLHP QDSQIVVMNR GTWRVKGIIQ VSRSIGDAYL KWPQFSLDPS FPRFHMPEPI TQPVLTAEPS LCSRVLQPHD KFLIFASDGL WEYMTNQQAA
301: EIVQKNPRNG VARKLVKAAL KEAANKRKMK YKELQKIEKG NRRIFHDDIT VIVVFIDHEL LGKKITVPEL SIRGFIDSAG PSNFKSVQEF M

Best Arabidopsis Sequence Match ( AT5G06750.1 )
(BLAST)

001: MFSWLARMAL FCLRPMRRYG RMNRDDDDDD DHDGDSSSSG DSLLWSRELE RHSFGDFSIA VVQANEVIED HSQVETGNGA VFVGVYDGHG GPEASRYISD
101: HLFSHLMRVS RERSCISEEA LRAAFSATEE GFLTLVRRTC GLKPLIAAVG SCCLVGVIWK GTLLIANVGD SRAVLGSMGS NNNRSNKIVA EQLTSDHNAA
201: LEEVRQELRS LHPDDSHIVV LKHGVWRIKG IIQVSRSIGD AYLKRPEFSL DPSFPRFHLA EELQRPVLSA EPCVYTRVLQ TSDKFVIFAS DGLWEQMTNQ
301: QAVEIVNKHP RPGIARRLVR RAITIAAKKR EMNYDDLKKV ERGVRRFFHD DITVVVIFID NELLMVEKAT VPELSIKGFS HTVGPSKFSI FLS

Arabidopsis Description

Probable protein phosphatase 2C 68 [Source:UniProtKB/Swiss-Prot;Acc:Q84JD5]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.