CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 5
plastid 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH36089	Soybean	cytosol	97.98	97.98
VIT_03s0038g02650.t01	Wine grape	mitochondrion	84.38	84.38
GSMUA_Achr4P04870_001	Banana	cytosol	69.52	80.7
GSMUA_Achr3P00610_001	Banana	cytosol	70.53	80.46
GSMUA_Achr3P26820_001	Banana	mitochondrion	76.83	77.41
Os06t0717800-01	Rice	mitochondrion	76.32	77.3
KRH69725	Soybean	mitochondrion	76.57	77.16
KRH07984	Soybean	mitochondrion	76.32	76.9
EER90402	Sorghum	mitochondrion	75.31	76.86
CDX73725	Canola	vacuole	72.04	75.86
CDY16313	Canola	extracellular	71.79	75.6
TraesCS7D01G524700.1	Wheat	mitochondrion	74.31	75.26
AT4G38520.1	Thale cress	mitochondrion	75.82	75.25
Zm00001d014797_P001	Maize	mitochondrion	74.56	75.13
Zm00001d027570_P001	Maize	cytosol, peroxisome, plastid	67.51	75.07
GSMUA_Achr1P26350_001	Banana	mitochondrion, peroxisome, plastid	75.06	75.06
AT3G51370.1	Thale cress	cytosol, extracellular	71.54	74.93
TraesCS7B01G455500.1	Wheat	mitochondrion	73.8	74.74
HORVU7Hr1G117970.1	Barley	mitochondrion	73.8	74.74
Bra038895.1-P	Field mustard	plastid	71.79	74.61
CDY33283	Canola	plastid	71.79	74.61
AT5G66080.1	Thale cress	plastid	72.29	74.55
GSMUA_Achr5P11520_001	Banana	mitochondrion	74.06	74.24
TraesCS7A01G537000.1	Wheat	mitochondrion	73.3	74.23
GSMUA_Achr8P13120_001	Banana	cytosol	72.54	73.47
Os03t0137200-01	Rice	mitochondrion	73.8	73.43
Bra010741.1-P	Field mustard	plastid	69.27	72.37
Bra033566.1-P	Field mustard	cytosol, nucleus, plastid	72.29	72.29
CDX90277	Canola	cytosol, mitochondrion, nucleus	69.02	72.11
CDY12086	Canola	cytosol, mitochondrion, nucleus	69.02	72.11
Zm00001d027572_P004	Maize	cytosol, peroxisome, plastid	72.04	71.68
Zm00001d047385_P004	Maize	cytosol, mitochondrion, plastid	71.79	71.61
EER94559	Sorghum	cytosol	70.78	71.5
Os10t0544900-01	Rice	plastid	70.78	71.5
TraesCS5A01G505300.1	Wheat	mitochondrion	71.79	71.43
Zm00001d027571_P003	Maize	cytosol	71.54	71.18
TraesCS4D01G331100.1	Wheat	mitochondrion	71.54	71.18
HORVU4Hr1G080570.1	Barley	mitochondrion	71.54	71.18
TraesCS4B01G335500.1	Wheat	mitochondrion	71.03	70.5
GSMUA_Achr9P24110_001	Banana	cytosol	70.53	70.0
GSMUA_Achr7P03910_001	Banana	cytosol, nucleus, peroxisome	67.25	69.71
EER95550	Sorghum	mitochondrion, peroxisome, plastid	69.77	69.42
Zm00001d048359_P004	Maize	mitochondrion, peroxisome, plastid	72.8	69.3
CDY54807	Canola	nucleus, peroxisome, plastid	68.01	69.23
CDY70696	Canola	extracellular, peroxisome	56.42	69.14
TraesCS1A01G205300.2	Wheat	cytosol, peroxisome, plastid	67.76	68.62
TraesCS1B01G218900.1	Wheat	cytosol, peroxisome, plastid	67.76	68.62
TraesCS1D01G208600.1	Wheat	cytosol, peroxisome, plastid	67.76	68.62
HORVU1Hr1G052770.6	Barley	nucleus, peroxisome, plastid	68.26	67.92
KRH67612	Soybean	cytosol	58.44	64.99
KRG95894	Soybean	cytosol	60.2	64.59
KRG93033	Soybean	mitochondrion	62.22	63.66
KRH36281	Soybean	mitochondrion	61.96	63.24
KRH32367	Soybean	cytosol	58.69	62.8
KRH19775	Soybean	cytosol	58.44	62.53
KRH11926	Soybean	cytosol	56.93	60.75
KRH36962	Soybean	cytosol	56.42	59.89
CDY29015	Canola	cytosol	53.9	59.44
KRH02370	Soybean	cytosol, extracellular, plastid	55.67	58.93
KRH50715	Soybean	mitochondrion, peroxisome, plastid	55.42	58.82
CDX78002	Canola	vacuole	71.79	57.11
Bra036813.1-P	Field mustard	vacuole	71.79	57.11
Zm00001d036395_P008	Maize	mitochondrion	74.06	55.26
KRH38102	Soybean	mitochondrion	51.89	53.51
KRH71850	Soybean	mitochondrion	49.12	53.28
KRG91074	Soybean	cytosol, mitochondrion	49.37	52.55
KRH35699	Soybean	mitochondrion	49.87	52.38
KRH77072	Soybean	cytosol	49.12	51.72
KRH28403	Soybean	cytosol	48.61	51.47
KRG95384	Soybean	mitochondrion	49.37	50.13
KRH37115	Soybean	cytosol, nucleus, peroxisome	23.68	22.98
KRH50856	Soybean	cytosol, nucleus, peroxisome	26.95	20.58
KRH02249	Soybean	cytosol, nucleus, peroxisome	26.45	20.04
KRH49093	Soybean	cytosol, mitochondrion, nucleus, plastid	28.72	18.94
KRG99924	Soybean	cytosol, mitochondrion, nucleus, plastid	27.96	18.59
KRH24796	Soybean	nucleus	33.0	18.19
KRH29800	Soybean	cytosol, nucleus, plastid	32.75	18.06
KRH28277	Soybean	plastid	30.98	16.64
KRH04317	Soybean	cytosol, nucleus, plastid	29.22	16.55
KRH58222	Soybean	cytosol, nucleus, peroxisome	28.72	16.38
KRH77217	Soybean	plastid	30.98	16.33
KRH68360	Soybean	cytosol, nucleus, peroxisome	31.23	13.98
KRG96628	Soybean	cytosol, nucleus, peroxisome	30.73	13.75

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100794801	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	EMBL:ACUP02012629
EnsemblPlantsGene:GLYMA_20G106800	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	UniProt:I1NF89	InterPro:IPR001932	InterPro:IPR036457
EnsemblPlants:KRG90665	ProteinID:KRG90665	ProteinID:KRG90665.1	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF342
SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000233DB80	:	:	:

Description

hypothetical protein

Coordinates

chr20:-:34934235..34939203

Molecular Weight (calculated)

43660.0 Da

IEP (calculated)

7.694

GRAVY (calculated)

-0.270

Length

397 amino acids

Sequence
(BLAST)

001: MLSGLMNLLR ACFRPGSDGF TRAGSDAGGR QDGLLWYKDS GQHLNGDFSM AVIQANNLLE DQSQIESGCL SSNESGPYGT FIGVYDGHGG PETSRFINDH
101: LFHHLKRFTS EQQSMSVDVI RKALQATEEG FISVVARQFS LSPQIAAVGS CCLVGVICNG TLYIANLGDS RAVLGRAVKA TGEVLAMQLS AEHNASIETV
201: RQELHASHPD DPNIVVLKHN VWRVKGLIQV SRSIGDVYLK KAEFNREPLY AKFRLREPYK MPILSSEPSI SVHHLQPHDQ FIIFASDGLW EHLSNQEAVD
301: IVQNSPRSGS ARRLVKAALQ EAAKKREMRY SDLKKIDRGV RRHFHDDTTV IVVYLDSNLV SRESTVKFPG ISVRGGGINL PHNTLAPCTT PTEIGGN

Best Arabidopsis Sequence Match ( AT4G38520.2 )
(BLAST)

001: MLSGLMNFLN ACLWPRSDQQ ARSASDSGGR QEGLLWFRDS GQHVFGDFSM AVVQANSLLE DQSQLESGSL SSHDSGPFGT FVGVYDGHGG PETSRFINDH
101: MFHHLKRFTA EQQCMSSEVI KKAFQATEEG FLSIVTNQFQ TRPQIATVGS CCLVSVICDG KLYVANAGDS RAVLGQVMRV TGEAHATQLS AEHNASIESV
201: RRELQALHPD HPDIVVLKHN VWRVKGIIQV SRSIGDVYLK RSEFNREPLY AKFRLRSPFS KPLLSAEPAI TVHTLEPHDQ FIICASDGLW EHMSNQEAVD
301: IVQNHPRNGI AKRLVKVALQ EAAKKREMRY SDLKKIDRGV RRHFHDDITV IVVFFDTNLV SRGSMLRGPA VSVRGAGVNL PHNTLAPCTT PTQAAAAGAS

Arabidopsis Description

APD6 [Source:UniProtKB/TrEMBL;Acc:A0A178UT21]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.