Factsheet for Bra010741.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
extracellular 2
nucleus 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90277	Canola	cytosol, mitochondrion, nucleus	98.95	98.95
AT4G38520.1	Thale cress	mitochondrion	86.05	81.75
Bra033566.1-P	Field mustard	cytosol, nucleus, plastid	84.21	80.6
Solyc10g055650.1.1	Tomato	cytosol	65.79	73.75
PGSC0003DMT400046486	Potato	mitochondrion	73.68	72.16
Solyc01g111730.2.1	Tomato	cytosol, mitochondrion, plastid	73.68	72.16
PGSC0003DMT400068706	Potato	mitochondrion	72.11	71.54
Bra038895.1-P	Field mustard	plastid	71.58	71.2
Zm00001d027570_P001	Maize	cytosol, peroxisome, plastid	66.05	70.31
KRG90665	Soybean	mitochondrion	72.37	69.27
KRH36089	Soybean	cytosol	72.11	69.02
GSMUA_Achr4P04870_001	Banana	cytosol	61.84	68.71
PGSC0003DMT400009248	Potato	mitochondrion	69.74	67.95
GSMUA_Achr3P00610_001	Banana	cytosol	62.11	67.82
Solyc02g083420.2.1	Tomato	mitochondrion	69.47	67.69
Os03t0137200-01	Rice	mitochondrion	71.05	67.67
KRH69725	Soybean	mitochondrion	69.74	67.26
VIT_03s0038g02650.t01	Wine grape	mitochondrion	70.26	67.25
TraesCS7B01G455500.1	Wheat	mitochondrion	68.95	66.84
Solyc03g033340.2.1	Tomato	mitochondrion	69.74	66.75
EER94559	Sorghum	cytosol	68.95	66.67
Zm00001d047385_P004	Maize	cytosol, mitochondrion, plastid	69.74	66.58
HORVU7Hr1G117970.1	Barley	mitochondrion	68.68	66.58
KRH07984	Soybean	mitochondrion	68.95	66.5
TraesCS1D01G208600.1	Wheat	cytosol, peroxisome, plastid	68.42	66.33
Os06t0717800-01	Rice	mitochondrion	68.42	66.33
TraesCS7A01G537000.1	Wheat	mitochondrion	68.42	66.33
TraesCS1A01G205300.2	Wheat	cytosol, peroxisome, plastid	68.42	66.33
TraesCS1B01G218900.1	Wheat	cytosol, peroxisome, plastid	68.42	66.33
PGSC0003DMT400058098	Potato	mitochondrion	69.21	66.25
GSMUA_Achr3P26820_001	Banana	mitochondrion	68.68	66.24
TraesCS7D01G524700.1	Wheat	mitochondrion	68.16	66.07
GSMUA_Achr5P11520_001	Banana	mitochondrion	68.68	65.91
Os10t0544900-01	Rice	plastid	68.16	65.9
EER90402	Sorghum	mitochondrion	67.37	65.81
Zm00001d027572_P004	Maize	cytosol, peroxisome, plastid	68.95	65.66
Zm00001d027571_P003	Maize	cytosol	68.42	65.16
HORVU1Hr1G052770.6	Barley	nucleus, peroxisome, plastid	68.42	65.16
TraesCS4D01G331100.1	Wheat	mitochondrion	68.16	64.91
TraesCS5A01G505300.1	Wheat	mitochondrion	68.16	64.91
TraesCS4B01G335500.1	Wheat	mitochondrion	68.16	64.75
GSMUA_Achr1P26350_001	Banana	mitochondrion, peroxisome, plastid	67.63	64.74
Zm00001d014797_P001	Maize	mitochondrion	67.11	64.72
HORVU4Hr1G080570.1	Barley	mitochondrion	67.89	64.66
EER95550	Sorghum	mitochondrion, peroxisome, plastid	67.11	63.91
Zm00001d048359_P004	Maize	mitochondrion, peroxisome, plastid	68.95	62.83
Bra034749.1-P	Field mustard	cytosol, mitochondrion, plastid	63.42	62.11
Bra038738.1-P	Field mustard	cytosol, mitochondrion, plastid	63.16	62.02
GSMUA_Achr7P03910_001	Banana	cytosol, nucleus, peroxisome	62.37	61.88
GSMUA_Achr8P13120_001	Banana	cytosol	63.42	61.48
Bra014778.1-P	Field mustard	cytosol, mitochondrion, plastid	60.79	60.47
GSMUA_Achr9P24110_001	Banana	cytosol	63.16	60.0
VIT_00s0434g00020.t01	Wine grape	cytosol	63.95	59.56
Bra007131.1-P	Field mustard	mitochondrion	60.53	59.43
Bra028865.1-P	Field mustard	mitochondrion	54.74	57.78
Bra005755.1-P	Field mustard	cytosol	53.68	57.14
Bra009569.1-P	Field mustard	mitochondrion	54.47	57.02
Bra021218.1-P	Field mustard	plastid	56.05	56.35
Bra028720.1-P	Field mustard	mitochondrion	53.42	52.86
Bra036813.1-P	Field mustard	vacuole	68.42	52.1
Bra036972.1-P	Field mustard	mitochondrion	50.79	51.6
Bra009224.1-P	Field mustard	cytosol, mitochondrion	45.0	49.57
Bra034592.1-P	Field mustard	mitochondrion	49.74	49.09
Zm00001d036395_P008	Maize	mitochondrion	66.84	47.74
Bra022166.1-P	Field mustard	cytosol	21.58	35.19
Bra015596.1-P	Field mustard	endoplasmic reticulum, plasma membrane	20.79	29.48
Bra030695.1-P	Field mustard	cytosol, nucleus, peroxisome	29.74	19.52
Bra041012.1-P	Field mustard	nucleus	30.53	17.11
Bra029766.1-P	Field mustard	nucleus	28.42	16.77
Bra001308.1-P	Field mustard	nucleus	29.47	16.37
Bra017322.1-P	Field mustard	nucleus	29.21	15.04
Bra005350.1-P	Field mustard	mitochondrion, plastid	28.42	14.5
Bra009593.1-P	Field mustard	nucleus	29.74	14.05
Bra004495.1-P	Field mustard	cytosol, nucleus, peroxisome	31.05	13.88

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	EnsemblPlantsGene:Bra010741	EnsemblPlants:Bra010741.1
EnsemblPlants:Bra010741.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	UniProt:M4D2N8
PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF237	SMART:SM00332	SUPFAM:SSF81606	SignalP:SignalP-noTM
UniParc:UPI0002546D1A	SEG:seg	:	:	:	:

Description

AT4G38520 (E=1e-184) | protein phosphatase 2C family protein / PP2C family protein

Coordinates

chrA08:+:16210103..16211750

Molecular Weight (calculated)

41984.2 Da

IEP (calculated)

8.175

GRAVY (calculated)

-0.278

Length

380 amino acids

Sequence
(BLAST)

001: MLSALMNFLN ACLWPHSDSA SVSSGGGGRQ EGLLWYRDSG HHVFGDFSMA VVQANNLLED QSQLESGPLS TNGSAGPYGT FLGVYDGHGG PETSRFINDH
101: MFNHLKRFAA EEQCMSPEVI KKAFQATEEG FLSIVTNQFQ TRPQIATVGS CCLVTVICDG TLYVANAGDS RAVLGQVMKA TGDVHATQLS DEHNASIESV
201: RRELQALHPD HPDIVVLKHN VWRVKGIIQV SRSIGDVYLK RSEFNREPLY AKFRLRAPFS RPLLSAEPAV TVHRLKEQDK FIICASDGLW EHMSNQEAVE
301: MVQNHPRNGI AKRLVKVALQ EAAKKREMRY SDLKKIERGV RRHFHDDITV IVVFLDAKPG EVKGPAVSVK GAGVSIPKKT

Best Arabidopsis Sequence Match ( AT4G38520.2 )
(BLAST)

001: MLSGLMNFLN ACLWPRSDQQ ARSASDSGGR QEGLLWFRDS GQHVFGDFSM AVVQANSLLE DQSQLESGSL SSHDSGPFGT FVGVYDGHGG PETSRFINDH
101: MFHHLKRFTA EQQCMSSEVI KKAFQATEEG FLSIVTNQFQ TRPQIATVGS CCLVSVICDG KLYVANAGDS RAVLGQVMRV TGEAHATQLS AEHNASIESV
201: RRELQALHPD HPDIVVLKHN VWRVKGIIQV SRSIGDVYLK RSEFNREPLY AKFRLRSPFS KPLLSAEPAI TVHTLEPHDQ FIICASDGLW EHMSNQEAVD
301: IVQNHPRNGI AKRLVKVALQ EAAKKREMRY SDLKKIDRGV RRHFHDDITV IVVFFDTNLV SRGSMLRGPA VSVRGAGVNL PHNTLAPCTT PTQAAAAGAS

Arabidopsis Description

APD6 [Source:UniProtKB/TrEMBL;Acc:A0A178UT21]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.