Factsheet for Bra022166.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 1
plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	peroxisome
Plant-mPloc:	cytosol, nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g066870.2.1	Tomato	cytosol, nucleus, peroxisome	64.38	47.32
CDY43107	Canola	cytosol, nucleus, peroxisome	99.14	47.14
CDX92079	Canola	cytosol, nucleus, peroxisome	99.57	46.77
AT3G16560.1	Thale cress	cytosol, nucleus, peroxisome	94.85	44.83
GSMUA_Achr10P...	Banana	cytosol	64.81	42.54
KRH37115	Soybean	cytosol, nucleus, peroxisome	72.53	41.32
Bra015596.1-P	Field mustard	endoplasmic reticulum, plasma membrane	45.06	39.18
VIT_05s0020g01460.t01	Wine grape	cytosol, peroxisome, plastid	72.1	33.4
KRH50856	Soybean	cytosol, nucleus, peroxisome	72.1	32.31
KRH02249	Soybean	cytosol, nucleus, peroxisome	70.39	31.3
PGSC0003DMT400011807	Potato	nucleus	66.09	31.05
PGSC0003DMT400029441	Potato	cytosol, nucleus, peroxisome	64.38	28.79
Os04t0403701-01	Rice	cytosol, nucleus, peroxisome	63.52	28.46
EES12087	Sorghum	cytosol	62.66	28.02
Zm00001d025323_P004	Maize	cytosol, peroxisome, plastid	62.23	27.83
Zm00001d000124_P003	Maize	cytosol, peroxisome, plastid	61.37	27.45
Solyc12g099600.1.1	Tomato	plasma membrane	67.38	27.3
HORVU2Hr1G071850.2	Barley	nucleus	60.52	27.17
TraesCS2B01G307000.1	Wheat	nucleus	60.09	26.98
TraesCS2A01G290500.1	Wheat	nucleus	59.66	26.78
TraesCS2D01G288400.1	Wheat	nucleus	59.23	25.32
Bra028865.1-P	Field mustard	mitochondrion	33.48	21.67
Bra028720.1-P	Field mustard	mitochondrion	35.62	21.61
Bra010741.1-P	Field mustard	plastid	35.19	21.58
Bra005755.1-P	Field mustard	cytosol	33.05	21.57
Bra009224.1-P	Field mustard	cytosol, mitochondrion	31.33	21.16
Bra014778.1-P	Field mustard	cytosol, mitochondrion, plastid	34.33	20.94
Bra009569.1-P	Field mustard	mitochondrion	32.62	20.94
Bra038895.1-P	Field mustard	plastid	33.91	20.68
Bra033566.1-P	Field mustard	cytosol, nucleus, plastid	34.76	20.4
Bra034749.1-P	Field mustard	cytosol, mitochondrion, plastid	33.91	20.36
Bra038738.1-P	Field mustard	cytosol, mitochondrion, plastid	33.48	20.16
Bra007131.1-P	Field mustard	mitochondrion	33.48	20.16
Bra021218.1-P	Field mustard	plastid	31.76	19.58
Bra036972.1-P	Field mustard	mitochondrion	31.33	19.52
Bra034592.1-P	Field mustard	mitochondrion	31.76	19.22
Bra030695.1-P	Field mustard	cytosol, nucleus, peroxisome	44.21	17.79
Bra029766.1-P	Field mustard	nucleus	43.78	15.84
Bra036813.1-P	Field mustard	vacuole	33.91	15.83
Bra041012.1-P	Field mustard	nucleus	43.78	15.04
Bra001308.1-P	Field mustard	nucleus	43.78	14.91
Bra017322.1-P	Field mustard	nucleus	43.35	13.69
Bra005350.1-P	Field mustard	mitochondrion, plastid	42.92	13.42
Bra009593.1-P	Field mustard	nucleus	43.78	12.69
Bra004495.1-P	Field mustard	cytosol, nucleus, peroxisome	44.64	12.24

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.3	Gene3D:3.60.40.10	EnsemblPlantsGene:Bra022166	EnsemblPlants:Bra022166.1
EnsemblPlants:Bra022166.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932
InterPro:IPR036457	UniProt:M4E069	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF538	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0002547737
SEG:seg	:	:	:	:	:

Description

AT3G16560 (E=5e-114) | protein phosphatase 2C-related / PP2C-related

Coordinates

chrA05:+:19368763..19369620

Molecular Weight (calculated)

25776.3 Da

IEP (calculated)

6.255

GRAVY (calculated)

-0.039

Length

233 amino acids

Sequence
(BLAST)

001: MVEQEMEERP DLVSVGSCVL VTLLVGKDLY IMNLGDSRAV LATYNGNKKL QAVQLTEDHT VDNEIEEARL LSEHLDDPKI VIGGKIKGKL KVTRALGVGY
101: LKKEKLNDAL MGILRVRNLL SPPYVSVEPS MRVHKITESD HFVIVASDGL FDFFSNEEAI ELVHGFIASN PCGDPAKFLL ERLVAKAAAR VGFTLEELLN
201: VPAGRKRRYH DDVTVMVITL GTDQRTSKAS TFV

Best Arabidopsis Sequence Match ( AT3G16560.1 )
(BLAST)

001: MQEGTDPYGE IEISFGYQCN NKKIGIPEDK IADGREVLGG FRLQKTSSFS CLSGAALSGN PTLANTNICN GVIGSEILPS LDSPKSFRKV PSSPALSKLD
101: ILSPSLHGSM VSLSCSSSTS PSPPEPESCY LTSMSSPSSV NEGFLLSAME VQVAGGAAGE DRVQAVCSEE NGWLFCAIYD GFNGRDAADF LACTLYESIV
201: FHLQLLDRQM KQTKSDDDGE KLELLSNISN VDYSSTDLFR QGVLDCLNRA LFQAETDFLR MVEQEMEERP DLVSVGSCVL VTLLVGKDLY VLNLGDSRAV
301: LATYNGNKKL QAVQLTEDHT VDNEVEEARL LSEHLDDPKI VIGGKIKGKL KVTRALGVGY LKKEKLNDAL MGILRVRNLL SPPYVSVEPS MRVHKITESD
401: HFVIVASDGL FDFFSNEEAI GLVHSFVSSN PSGDPAKFLL ERLVAKAAAR AGFTLEELTN VPAGRRRRYH DDVTIMVITL GTDQRTSKAS TFV

Arabidopsis Description

Protein phosphatase 2C family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VFN3]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.