Factsheet for Bra009224.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70071	Canola	cytosol, mitochondrion	100.0	90.08
AT5G06750.3	Thale cress	cytosol, mitochondrion	85.22	74.81
Bra028720.1-P	Field mustard	mitochondrion	83.19	74.74
Zm00001d017643_P001	Maize	mitochondrion	66.38	59.17
VIT_08s0007g06510.t01	Wine grape	mitochondrion	66.38	58.72
GSMUA_Achr8P13470_001	Banana	mitochondrion	64.93	58.64
Os02t0685600-01	Rice	mitochondrion, plasma membrane	64.06	57.11
KXG30997	Sorghum	mitochondrion	63.77	56.7
KRG95384	Soybean	mitochondrion	63.77	56.27
TraesCS2B01G478400.2	Wheat	cytosol, mitochondrion, peroxisome, plastid	61.45	54.36
TraesCS2D01G456600.2	Wheat	mitochondrion	61.45	54.36
TraesCS2A01G456300.2	Wheat	cytosol, mitochondrion, peroxisome, plastid	61.16	54.1
HORVU2Hr1G104630.4	Barley	cytosol, mitochondrion, nucleus, peroxisome	61.16	54.1
KXG26992	Sorghum	cytosol, mitochondrion	59.71	52.42
Zm00001d002542_P001	Maize	cytosol, mitochondrion	59.42	52.3
PGSC0003DMT400029771	Potato	cytosol, mitochondrion, peroxisome	53.04	47.41
Bra038895.1-P	Field mustard	plastid	49.86	45.03
Bra010741.1-P	Field mustard	plastid	49.57	45.0
PGSC0003DMT400029765	Potato	mitochondrion	53.04	44.74
PGSC0003DMT400029763	Potato	cytosol, mitochondrion	50.43	44.62
Bra033566.1-P	Field mustard	cytosol, nucleus, plastid	49.28	42.82
Bra034749.1-P	Field mustard	cytosol, mitochondrion, plastid	48.12	42.78
Bra036972.1-P	Field mustard	mitochondrion	45.8	42.25
Bra038738.1-P	Field mustard	cytosol, mitochondrion, plastid	47.25	42.12
Solyc10g078810.1.1	Tomato	cytosol	52.75	41.55
Bra021218.1-P	Field mustard	plastid	45.51	41.53
Bra005755.1-P	Field mustard	cytosol	42.9	41.46
Bra028865.1-P	Field mustard	mitochondrion	42.9	41.11
Bra009569.1-P	Field mustard	mitochondrion	43.19	41.05
Bra014778.1-P	Field mustard	cytosol, mitochondrion, plastid	45.22	40.84
Bra007131.1-P	Field mustard	mitochondrion	45.51	40.57
Solyc10g078820.1.1	Tomato	mitochondrion	53.62	40.22
Bra034592.1-P	Field mustard	mitochondrion	44.35	39.74
PGSC0003DMT400029770	Potato	mitochondrion	46.09	37.32
PGSC0003DMT400029776	Potato	cytosol	19.42	36.41
Bra036813.1-P	Field mustard	vacuole	50.72	35.07
Bra022166.1-P	Field mustard	cytosol	21.16	31.33
Bra015596.1-P	Field mustard	endoplasmic reticulum, plasma membrane	19.13	24.63
Bra030695.1-P	Field mustard	cytosol, nucleus, peroxisome	28.99	17.27
Bra041012.1-P	Field mustard	nucleus	29.28	14.9
Bra029766.1-P	Field mustard	nucleus	26.67	14.29
Solyc10g078800.1.1	Tomato	mitochondrion	51.59	13.57
Bra001308.1-P	Field mustard	nucleus	26.38	13.3
Bra017322.1-P	Field mustard	nucleus	27.54	12.87
Bra005350.1-P	Field mustard	mitochondrion, plastid	26.96	12.48
Bra009593.1-P	Field mustard	nucleus	27.83	11.94
Bra004495.1-P	Field mustard	cytosol, nucleus, peroxisome	27.54	11.18

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	EnsemblPlantsGene:Bra009224	EnsemblPlants:Bra009224.1
EnsemblPlants:Bra009224.1-P	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722
GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457
UniProt:M4CYC7	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF239	SMART:SM00332	SUPFAM:SSF81606
UniParc:UPI00025451CE	SEG:seg	:	:	:	:

Description

AT5G06750 (E=2e-086) | protein phosphatase 2C family protein / PP2C family protein

Coordinates

chrA10:-:15719922..15723118

Molecular Weight (calculated)

38617.5 Da

IEP (calculated)

7.746

GRAVY (calculated)

-0.194

Length

345 amino acids

Sequence
(BLAST)

001: MSSSLVKMVL FCLRPVRRYA LMIKDDEDDS DDHDDSLLWS RELERHSLGD FSMAVVQANE VIEDHSEVET GKGAVFVGVY DGHGGPEASR YISDHLFAHL
101: IRNSRERGVI TEETLRGAFS ATERGFLTLV RRTRGLKPLI AAAGSCCLVG VIRKGTLLIA NLGDSRAVLG SMNRSNKIVA EQLTSDHNAA QEEVRQELRS
201: LHPDDPRIVV HKQGLQRPVL SAEPCVYTRV LQTSDKFVIF ASDGLWEHVS NQQAVEIVHK HPRPGIARML VRRAMNIAAK KKGMMYDDLK KVERGVRRFF
301: HDDITVAVIF IDNELLMVEK ATVPELSIKG FSHTVGPSKF SLFFS

Best Arabidopsis Sequence Match ( AT5G06750.1 )
(BLAST)

001: MFSWLARMAL FCLRPMRRYG RMNRDDDDDD DHDGDSSSSG DSLLWSRELE RHSFGDFSIA VVQANEVIED HSQVETGNGA VFVGVYDGHG GPEASRYISD
101: HLFSHLMRVS RERSCISEEA LRAAFSATEE GFLTLVRRTC GLKPLIAAVG SCCLVGVIWK GTLLIANVGD SRAVLGSMGS NNNRSNKIVA EQLTSDHNAA
201: LEEVRQELRS LHPDDSHIVV LKHGVWRIKG IIQVSRSIGD AYLKRPEFSL DPSFPRFHLA EELQRPVLSA EPCVYTRVLQ TSDKFVIFAS DGLWEQMTNQ
301: QAVEIVNKHP RPGIARRLVR RAITIAAKKR EMNYDDLKKV ERGVRRFFHD DITVVVIFID NELLMVEKAT VPELSIKGFS HTVGPSKFSI FLS

Arabidopsis Description

Probable protein phosphatase 2C 68 [Source:UniProtKB/Swiss-Prot;Acc:Q84JD5]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.