Factsheet for PGSC0003DMT400029765

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 6
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	nucleus
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400029771	Potato	cytosol, mitochondrion, peroxisome	79.46	84.2
PGSC0003DMT400029776	Potato	cytosol	36.43	80.98
PGSC0003DMT400029770	Potato	mitochondrion	76.28	73.24
PGSC0003DMT400029763	Potato	cytosol, mitochondrion	65.04	68.21
VIT_08s0007g06510.t01	Wine grape	mitochondrion	52.08	54.62
Bra009224.1-P	Field mustard	cytosol, mitochondrion	44.74	53.04
KRH38102	Soybean	mitochondrion	49.63	52.73
GSMUA_Achr8P13470_001	Banana	mitochondrion	48.9	52.36
Os02t0685600-01	Rice	mitochondrion, plasma membrane	48.66	51.42
KRG95384	Soybean	mitochondrion	49.14	51.41
KRH71850	Soybean	mitochondrion	45.97	51.37
AT5G06750.3	Thale cress	cytosol, mitochondrion	48.9	50.89
KXG26992	Sorghum	cytosol, mitochondrion	48.66	50.64
Bra028720.1-P	Field mustard	mitochondrion	47.19	50.26
KXG30997	Sorghum	mitochondrion	47.68	50.26
TraesCS2B01G478400.2	Wheat	cytosol, mitochondrion, peroxisome, plastid	47.92	50.26
TraesCS2A01G456300.2	Wheat	cytosol, mitochondrion, peroxisome, plastid	47.68	50.0
HORVU2Hr1G104630.4	Barley	cytosol, mitochondrion, nucleus, peroxisome	47.43	49.74
TraesCS2D01G456600.2	Wheat	mitochondrion	47.43	49.74
PGSC0003DMT400068706	Potato	mitochondrion	42.3	45.17
PGSC0003DMT400066175	Potato	cytosol	39.85	43.47
PGSC0003DMT400013942	Potato	cytosol, mitochondrion	39.12	43.13
PGSC0003DMT400064207	Potato	cytosol	39.12	43.01
PGSC0003DMT400028715	Potato	cytosol	39.36	42.82
PGSC0003DMT400067223	Potato	mitochondrion	38.14	41.71
PGSC0003DMT400009248	Potato	mitochondrion	39.61	41.54
PGSC0003DMT400046486	Potato	mitochondrion	39.36	41.49
CDY40818	Canola	mitochondrion	12.71	41.27
PGSC0003DMT400005115	Potato	cytosol	36.92	39.95
PGSC0003DMT400058098	Potato	mitochondrion	38.63	39.8
CDY51276	Canola	mitochondrion	8.07	39.76
PGSC0003DMT400060005	Potato	cytosol	36.43	38.8
Solyc10g078800.1.1	Tomato	mitochondrion	85.33	26.6
PGSC0003DMT400029441	Potato	cytosol, nucleus, peroxisome	25.43	19.96
PGSC0003DMT400011807	Potato	nucleus	24.21	19.96
PGSC0003DMT400049278	Potato	cytosol, nucleus, peroxisome	25.18	17.17
PGSC0003DMT400022788	Potato	cytosol, nucleus, peroxisome	24.94	16.16
PGSC0003DMT400078173	Potato	nucleus	26.16	15.03
PGSC0003DMT400045127	Potato	nucleus	25.43	13.03
PGSC0003DMT400052881	Potato	nucleus	24.21	12.68
PGSC0003DMT400022786	Potato	cytosol, nucleus, peroxisome	6.85	8.24

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:102604141	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169
GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	UniProt:M1ATD5	PFAM:PF00481	EnsemblPlantsGene:PGSC0003DMG400011441
PGSC:PGSC0003DMG400011441	EnsemblPlants:PGSC0003DMT400029765	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF239	SMART:SM00332	SUPFAM:SSF81606
UniParc:UPI0002959D7D	RefSeq:XP_006362223.1	SEG:seg	:	:	:

Description

Protein phosphatase 2c [Source:PGSC_GENE;Acc:PGSC0003DMG400011441]

Coordinates

chr10:+:58916393..58918781

Molecular Weight (calculated)

45493.0 Da

IEP (calculated)

5.325

GRAVY (calculated)

-0.213

Length

409 amino acids

Sequence
(BLAST)

001: MFRWLKRIVL VCCRPLSRYV GLSSGEDGVL GGEDLPVLWH RSLEKHSCGE FSCAMVQANQ VCEDYGHVEP GREGTFVGVY DGHGGHDASR FACDNLSRHL
101: ITLAREKGTI DEEVLNNAFA ATEDGFLSIV EREFHVDPGI ASTGCCCLVG VIWKRTLYVA NLGDCRAVLG HIGRFNRIVA EQLTNDHNVR IKDVRDELRA
201: LHPDNPNIVS RVGSSWCVKG IIKVTRAIGD AFLKKPEFSL GAIPLRRPVL RADPSVSSRN LQAVDRFVIF ASAGLWDLLS NEEAVQIVHT YPRQGIAKRL
301: VLSAMNVAAR ARKKYDELMN YDKGVSRALH DDITVVVIFI DHEMLNDELT VPGMSVRGFV DTHRPSHFNI EQEVATESEL TETEPTESEL TESEPTETEP
401: TETEPTETV

Best Arabidopsis Sequence Match ( AT3G17090.1 )
(BLAST)

001: MSGSLMNLFS LCFKPFGHVC DNSEAGSGGG GGVSGGTGGE GKDGLLWFRD LGKYCGGDFS MAVIQANQVL EDQSQVESGN FGTFVGVYDG HGGPEAARYV
101: CDHLFNHFRE ISAETQGVVT RETIERAFHA TEEGFASIVS ELWQEIPNLA TVGTCCLVGV IYQNTLFVAS LGDSRVVLGK KGNCGGLSAI QLSTEHNANN
201: EDIRWELKDL HPDDPQIVVF RHGVWRVKGI IQVSRSIGDM YMKRPEFNKE PISQKFRIAE PMKRPLMSAT PTILSHPLHP NDSFLIFASD GLWEHLTNEK
301: AVEIVHNHPR AGSAKRLIKA ALHEAARKRE MRYSDLRKID KKVRRHFHDD ITVIVVFLNH DLISRGHINS TQDTTVSIRS ALEH

Arabidopsis Description

Probable protein phosphatase 2C 42 [Source:UniProtKB/Swiss-Prot;Acc:Q0V7V2]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.