Factsheet for PGSC0003DMT400052881

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g007000.2.1	Tomato	nucleus	97.18	97.18
PGSC0003DMT400045127	Potato	nucleus	81.56	79.82
VIT_02s0012g01100.t01	Wine grape	cytosol, nucleus, plastid	71.06	70.52
KRH28277	Soybean	plastid	63.89	67.52
KRH58222	Soybean	cytosol, nucleus, peroxisome	59.92	67.24
KRH04317	Soybean	cytosol, nucleus, plastid	60.31	67.19
KRH77217	Soybean	plastid	64.4	66.8
CDY68192	Canola	mitochondrion, nucleus, plastid	47.89	66.19
CDY59038	Canola	plastid	47.63	64.92
CDY31682	Canola	nucleus, plastid	54.03	63.46
CDX84217	Canola	nucleus, plastid	52.5	61.84
GSMUA_Achr5P13850_001	Banana	nucleus	47.38	60.86
Bra017322.1-P	Field mustard	nucleus	55.95	59.21
Bra005350.1-P	Field mustard	mitochondrion, plastid	56.34	59.06
AT2G35350.1	Thale cress	nucleus	57.75	57.6
Zm00001d019519_P001	Maize	extracellular	9.48	56.92
EES07427	Sorghum	plastid	43.53	56.76
TraesCS6D01G251300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	43.15	56.45
TraesCS6B01G290600.1	Wheat	plastid	43.15	56.45
TraesCS6A01G263600.1	Wheat	plastid	43.15	56.45
HORVU6Hr1G066850.2	Barley	plastid	42.89	56.11
Os02t0690500-01	Rice	plastid	42.77	56.04
Zm00001d017670_P001	Maize	plastid	42.77	55.76
Zm00001d016370_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	15.75	47.13
PGSC0003DMT400049278	Potato	cytosol, nucleus, peroxisome	34.57	45.0
PGSC0003DMT400078173	Potato	nucleus	40.33	44.24
PGSC0003DMT400022788	Potato	cytosol, nucleus, peroxisome	35.6	44.06
PGSC0003DMT400011807	Potato	nucleus	21.77	34.27
PGSC0003DMT400022786	Potato	cytosol, nucleus, peroxisome	14.85	34.12
PGSC0003DMT400029441	Potato	cytosol, nucleus, peroxisome	22.15	33.21
PGSC0003DMT400060005	Potato	cytosol	15.49	31.51
PGSC0003DMT400005115	Potato	cytosol	14.85	30.69
PGSC0003DMT400046486	Potato	mitochondrion	15.24	30.67
PGSC0003DMT400068706	Potato	mitochondrion	14.98	30.55
PGSC0003DMT400028715	Potato	cytosol	14.6	30.32
PGSC0003DMT400058098	Potato	mitochondrion	15.24	29.97
PGSC0003DMT400009248	Potato	mitochondrion	14.72	29.49
PGSC0003DMT400066175	Potato	cytosol	13.83	28.8
PGSC0003DMT400067223	Potato	mitochondrion	13.7	28.61
PGSC0003DMT400013942	Potato	cytosol, mitochondrion	13.19	27.76
PGSC0003DMT400064207	Potato	cytosol	13.06	27.42
PGSC0003DMT400029771	Potato	cytosol, mitochondrion, peroxisome	12.8	25.91
PGSC0003DMT400029763	Potato	cytosol, mitochondrion	12.93	25.9
PGSC0003DMT400029765	Potato	mitochondrion	12.68	24.21
PGSC0003DMT400029770	Potato	mitochondrion	11.01	20.19
PGSC0003DMT400029776	Potato	cytosol	3.71	15.76

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:102599769	MapMan:18.4.24.2.3	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	UniProt:M1BU33	PFAM:PF00481
EnsemblPlantsGene:PGSC0003DMG400020517	PGSC:PGSC0003DMG400020517	EnsemblPlants:PGSC0003DMT400052881	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF241	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000295F1F4
RefSeq:XP_006362499.1	SEG:seg	:	:	:	:

Description

Protein phosphatase 2C 29 [Source:PGSC_GENE;Acc:PGSC0003DMG400020517]

Coordinates

chr8:-:1239345..1245862

Molecular Weight (calculated)

86176.4 Da

IEP (calculated)

5.007

GRAVY (calculated)

-0.463

Length

781 amino acids

Sequence
(BLAST)

001: MGGGFSQLFP CLDPAVNRGE PEVIFTGSEP LDETLGHSFC YVRSSARLVS PTNSDRFVSP SQSLRFDEPG RNRLTGSAET GFRAISGASV SANTSTPRTV
101: LQLDNIYDDA TGSDGSVVGF ACGVKGSVVN GFESTSSFCA LPLQPVPRGG EPSGPMERAF FMSGPIERGA LSGPLDTAAS SDGGGGVPFS APLGGAYVKK
201: RRKNGIAGIR KAFYRSFSEK KRPWVVPVRN FIGRKEMTAA GNCTRDSDAG SDSNVQWALG KAGEDRVHVV VSEEHGWLFV GIYDGFNGPD GPEFLMSHLY
301: KAMYKELEGL FWDSEETSNQ EAENAGLENE VITEDSNEPN SNREANPTNR GVEEGGNEVN LEHPDKGSEK KVTFQSGEIV VRRRRLWEYL AEAETEDGLD
401: LSGSDRFAFS VDDALSVNSA GSAVNRRSLL LSKLKHGLLI KHKESKRLFP WKFGLQAKEK VEVGENRVEE RTNRSERRRK VGPVDHELVL RAMSRALEFT
501: ELAYLDMTDK VLDRYPELAL MGSCLLVALM RDEDVYVMNA GDSRAIVAQY EPEEVSCSSE SRGPCNSELA VEGIVEEPIV AGDEESRVMN DIPIQAAKLT
601: ALQLSTDHST SIEEEVTRIK NEHPDDSNCI INDRVKGRLK VTRAFGAGFL KKPKLNEPLL EMFRNEYIGD APYLSCTPSL RHHKLCPRDQ FLVLSSDGLY
701: QYLSNLEVVC HIENFMEKFP DGDPAQHLIE ELLFRAAKKA GMDLHELLDI PQGDRRKYHD DVTVMVVSLE GRIWKSSGKY L

Best Arabidopsis Sequence Match ( AT2G35350.1 )
(BLAST)

001: MGSGFSSLLP CFNQGHRNRR RHSSAANPSH SDLIDSFREP LDETLGHSYC YVPSSSNRFI SPFPSDRFVS PTASFRLSPP HEPGRIRGSG SSEQLHTGFR
101: AISGASVSAN TSNSKTVLQL EDIYDDATES SFGGGVRRSV VNANGFEGTS SFSALPLQPG PDRSGLFMSG PIERGATSGP LDPPAGEISR SNSAGVHFSA
201: PLGGVYSKKR RKKKKKSLSW HPIFGGEKKQ RPWVLPVSNF VVGAKKENIV RPDVEAMAAS SGENDLQWAL GKAGEDRVQL AVFEKQGWLF AGIYDGFNGP
301: DAPEFLMANL YRAVHSELQG LFWELEEEDD NPTDISTREL EQQGEFEDHV NEMASSSCPA TEKEEEEMGK RLTSSLEVVE VKERKRLWEL LAEAQAEDAL
401: DLSGSDRFAF SVDDAIGAGN AVSVGSKRWL LLSKLKQGLS KQGISGRKLF PWKSGVEENE TEEVDNVGVE EGVDKRRKRR KAGTVDHELV LKAMSNGLEA
501: TEQAFLEMTD KVLETNPELA LMGSCLLVAL MRDDDVYIMN IGDSRALVAQ YQVEETGESV ETAERVEERR NDLDRDDGNK EPLVVDSSDS TVNNEAPLPQ
601: TKLVALQLTT DHSTSIEDEV TRIKNEHPDD NHCIVNDRVK GRLKVTRAFG AGFLKQPKLN DALLEMFRNE YIGTDPYISC TPSLRHYRLT ENDQFMVLSS
701: DGLYQYLSNV EVVSLAMEKF PDGDPAQHVI QELLVRAAKK AGMDFHELLD IPQGDRRKYH DDCTVLVIAL GGSRIWKSSG KYL

Arabidopsis Description

PLL1PLL1 [Source:UniProtKB/TrEMBL;Acc:A0A178VV40]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.