Factsheet for TraesCS6B01G290600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

peroxisome 1
mitochondrion 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, peroxisome, plastid
MultiLoc:	peroxisome
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G263600.1	Wheat	plastid	99.83	99.83
TraesCS6D01G251300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	99.83	99.83
HORVU6Hr1G066850.2	Barley	plastid	99.0	99.0
Os02t0690500-01	Rice	plastid	87.1	87.25
EES07427	Sorghum	plastid	87.44	87.15
Zm00001d017670_P001	Maize	plastid	84.76	84.47
Zm00001d019519_P001	Maize	extracellular	17.42	80.0
Zm00001d016370_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	34.0	77.78
GSMUA_Achr5P13850_001	Banana	nucleus	56.45	55.43
CDY68192	Canola	mitochondrion, nucleus, plastid	46.73	49.38
TraesCS4B01G382400.1	Wheat	cytosol	19.26	48.73
KRH58222	Soybean	cytosol, nucleus, peroxisome	56.28	48.28
CDY59038	Canola	plastid	46.06	47.99
KRH04317	Soybean	cytosol, nucleus, plastid	56.11	47.79
KRH28277	Soybean	plastid	56.78	45.87
CDY31682	Canola	nucleus, plastid	50.25	45.11
CDX84217	Canola	nucleus, plastid	49.92	44.95
KRH77217	Soybean	plastid	56.62	44.89
VIT_02s0012g01100.t01	Wine grape	cytosol, nucleus, plastid	58.29	44.22
Solyc08g007000.2.1	Tomato	nucleus	57.29	43.79
PGSC0003DMT400052881	Potato	nucleus	56.45	43.15
TraesCS5B01G492700.1	Wheat	mitochondrion, plastid	44.72	42.58
PGSC0003DMT400045127	Potato	nucleus	55.78	41.73
Solyc08g077150.2.1	Tomato	nucleus	55.61	41.71
Bra017322.1-P	Field mustard	nucleus	50.75	41.06
Bra005350.1-P	Field mustard	mitochondrion, plastid	50.75	40.67
AT2G35350.1	Thale cress	nucleus	51.09	38.95
TraesCS4B01G381900.1	Wheat	plastid	36.68	35.96
TraesCS2B01G307000.1	Wheat	nucleus	27.97	32.18
TraesCS1B01G042100.1	Wheat	mitochondrion, nucleus, peroxisome, plastid	30.49	29.17
TraesCS7B01G455500.1	Wheat	mitochondrion	18.76	28.57
TraesCS3B01G604000.1	Wheat	mitochondrion	18.43	28.5
TraesCS4B01G335500.1	Wheat	mitochondrion	18.76	28.0
TraesCS2B01G478400.2	Wheat	cytosol, mitochondrion, peroxisome, plastid	18.26	27.95
TraesCS1B01G218900.1	Wheat	cytosol, peroxisome, plastid	18.26	27.81
TraesCS5B01G404000.2	Wheat	mitochondrion	17.25	27.39
TraesCS5B01G510000.1	Wheat	cytosol, mitochondrion	17.42	27.23
TraesCS5B01G078500.1	Wheat	mitochondrion	15.75	24.54
TraesCS4B01G254700.1	Wheat	plastid	16.42	23.0
TraesCS3B01G094100.1	Wheat	cytosol	17.09	13.26

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.3	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0005488	GO:GO:0005543	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006139	GO:GO:0006355	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0008289	GO:GO:0009058	GO:GO:0009653	GO:GO:0009826	GO:GO:0009933	GO:GO:0009987
GO:GO:0010074	GO:GO:0016020	GO:GO:0016043	GO:GO:0016049	GO:GO:0016787	GO:GO:0019538
GO:GO:0040007	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF241	SMART:SM00332	SUPFAM:SSF81606
EnsemblPlantsGene:TraesCS6B01G290600	EnsemblPlants:TraesCS6B01G290600.1	TIGR:cd00143	SEG:seg	:	:

Description

No Description!

Coordinates

chr6B:+:523047579..523050779

Molecular Weight (calculated)

65166.8 Da

IEP (calculated)

5.383

GRAVY (calculated)

-0.260

Length

597 amino acids

Sequence
(BLAST)

001: MGSGASRLLT ACACSRPAPA SVDAEPCLDD ALGHSFCYAS AAAYSSSFRH GISGAALSAN SSVPVPLYLS SSAAGAGSVP QNYSSAFHTS SSFSSAPLQL
101: SNLSSGPLFL SGPIDRGAQL SGPLDAAVPF SGPLPTKPTK RTSSSSRGLS SRFRKPLFGS LRRSVSEKHQ PALMVPLRRD DGVQWAHGRA GEDRVHVVVS
201: EDQRWLFVGI YDGFNGPEAP DFLVANLYRF LLRELRGIFY EEADRDSKRL WQFLADGDDD DNELDFSGSG RFAMSLARLK ERRFNMWAHA AAVGDDEISR
301: EWGPKKLEAA PAVRDHGAVL GALTRALAST EAAYLDMTDQ SMGSHPELAV TGACLLVALV RDDDVYVMNL GDSRAIVAQR ADDDHGCGLG AMRMDDIGVG
401: LEIESRPVGY PMIGLEALQL SIDHSTSIEE EVQRIKREHP DDDQCIVNDR VKGRLKVTRA FGAGYLKQAK LNNGLLEMFR NEYIGDAPYI SCIPSLCHHK
501: LTSRDQFLVL SSDGLYQYLS NEEVVLHVEN FMERFPEGDP AQSLIEELLS RAAKKAGMDF YELLDIPQGD RRKYHDDVTV MVVSLEGRIW KSSGTYV

Best Arabidopsis Sequence Match ( AT1G07630.1 )
(BLAST)

001: MGNGVTKLSI CFTGGGGERL RPKDISVLLP DPLDEGLGHS FCYVRPDPTL ISSSKVHSEE DTTTTTFRTI SGASVSANTA TPLSTSLYDP YGHIDRAAAF
101: ESTTSFSSIP LQPIPKSSGP IVLGSGPIER GFLSGPIERG FMSGPLDRVG LFSGPLDKPN SDHHHQFQRS FSHGLALRVG SRKRSLVRIL RRAISKTMSR
201: GQNSIVAPIK SVKDSDNWGI RSEKSRNLHN ENLTVNSLNF SSEVSLDDDV SLENQNLQWA QGKAGEDRVH VVVSEEHGWL FVGIYDGFNG PDAPDYLLSH
301: LYPVVHRELK GLLWDDSNVE SKSQDLERSN GDESCSNQEK DETCERWWRC EWDRESQDLD RRLKEQISRR SGSDRLTNHS EVLEALSQAL RKTEEAYLDT
401: ADKMLDENPE LALMGSCVLV MLMKGEDIYV MNVGDSRAVL GQKSEPDYWL AKIRQDLERI NEETMMNDLE GCEGDQSSLV PNLSAFQLTV DHSTNIEEEV
501: ERIRNEHPDD VTAVTNERVK GSLKVTRAFG AGFLKQPKWN NALLEMFQID YVGKSPYINC LPSLYHHRLG SKDRFLILSS DGLYQYFTNE EAVSEVELFI
601: TLQPEGDPAQ HLVQELLFRA AKKAGMDFHE LLEIPQGERR RYHDDVSIVV ISLEGRMWKS CV

Arabidopsis Description

PLL5PLL5 [Source:UniProtKB/TrEMBL;Acc:A0A178WGF5]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.