Factsheet for TraesCS1B01G042100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid, nucleus

Predictor Summary:

peroxisome 1
mitochondrion 2
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G033700.1	Wheat	mitochondrion	71.47	74.58
HORVU1Hr1G005090.6	Barley	mitochondrion	69.55	69.89
Zm00001d011062_P001	Maize	cytosol, peroxisome, plastid	47.44	57.03
EES17579	Sorghum	mitochondrion, peroxisome, plastid	51.6	54.95
TraesCS4B01G382400.1	Wheat	cytosol	13.78	36.44
TraesCS5B01G492700.1	Wheat	mitochondrion, plastid	31.09	30.94
TraesCS6B01G290600.1	Wheat	plastid	29.17	30.49
TraesCS4B01G381900.1	Wheat	plastid	29.65	30.38
Os05t0111800-00	Rice	mitochondrion, peroxisome, plastid	27.56	27.7
TraesCS1B01G218900.1	Wheat	cytosol, peroxisome, plastid	14.9	23.72
TraesCS3B01G604000.1	Wheat	mitochondrion	14.26	23.06
TraesCS2B01G307000.1	Wheat	nucleus	18.75	22.54
TraesCS7B01G455500.1	Wheat	mitochondrion	14.1	22.45
TraesCS4B01G335500.1	Wheat	mitochondrion	13.46	21.0
TraesCS2B01G478400.2	Wheat	cytosol, mitochondrion, peroxisome, plastid	12.5	20.0
TraesCS5B01G510000.1	Wheat	cytosol, mitochondrion	11.7	19.11
TraesCS5B01G404000.2	Wheat	mitochondrion	11.38	18.88
TraesCS4B01G254700.1	Wheat	plastid	12.18	17.84
TraesCS5B01G078500.1	Wheat	mitochondrion	10.9	17.75
HORVU2Hr1G009260.1	Barley	mitochondrion	4.65	14.57
TraesCS3B01G094100.1	Wheat	cytosol	11.7	9.49

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.3	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF351	SMART:SM00332
SUPFAM:SSF81606	EnsemblPlantsGene:TraesCS1B01G042100	EnsemblPlants:TraesCS1B01G042100.1	TIGR:cd00143	SEG:seg	:

Description

No Description!

Coordinates

chr1B:-:22046378..22048675

Molecular Weight (calculated)

66785.0 Da

IEP (calculated)

8.217

GRAVY (calculated)

-0.435

Length

624 amino acids

Sequence
(BLAST)

001: MGNRAARLAT PCFASGGRSA VDAAGEGDGG DCAVGQILSF DGYDAFDGAT IHGVLLPSNQ STIGAASSSS ANSFSNQLSL SASSSCDSSS SFSFRTLQPG
101: LFSGSLDYCA SPSSSSSSGP NSGALSSAAS RRGARTEEDI MADLYATRRR RRCQLQDAAS GSPLLDRLRR AVASALRVGR AAKKQPAVTT VATNGGSGGV
201: IRSNGENGHA AEDKVQWARG KAGEDRVHVV VSEERGWMFV GIYDGFNGPD ATDYLVANLY ASVCRELPSD HDPALPDDEQ RRPPPSSSCN GRNSAGDLIR
301: RRGRHGAVLD ALARALRRTE EGYFAEAEAR AAECPELAMM GSCVLVLLMK GADVYSMNVG DSRAVLAHRA EPDLTSVIMP PRHRRQHSAD GHGHVTEEIR
401: RQFDECDMTE LVALQLTMEH STSAYKEVRR IRSEHLDDPA CILNGRVKGS LKVTRAFGAG YLKEPRWNKA LLEVFGWTML ASCLTLLASH FSGTTASGRR
501: TSSLSSPRTG STSTSPTRRW WGTWRRSPPG SPMRILPSTS ATRSSSAPLG KPGWGSMSCL RYDKGNGDST MTTSPSSSSH WRGRYGDLQL ELIMVDYKTI
601: MDSSDSIHGC IYGFQELAHE QSSA

Best Arabidopsis Sequence Match ( AT1G07630.1 )
(BLAST)

001: MGNGVTKLSI CFTGGGGERL RPKDISVLLP DPLDEGLGHS FCYVRPDPTL ISSSKVHSEE DTTTTTFRTI SGASVSANTA TPLSTSLYDP YGHIDRAAAF
101: ESTTSFSSIP LQPIPKSSGP IVLGSGPIER GFLSGPIERG FMSGPLDRVG LFSGPLDKPN SDHHHQFQRS FSHGLALRVG SRKRSLVRIL RRAISKTMSR
201: GQNSIVAPIK SVKDSDNWGI RSEKSRNLHN ENLTVNSLNF SSEVSLDDDV SLENQNLQWA QGKAGEDRVH VVVSEEHGWL FVGIYDGFNG PDAPDYLLSH
301: LYPVVHRELK GLLWDDSNVE SKSQDLERSN GDESCSNQEK DETCERWWRC EWDRESQDLD RRLKEQISRR SGSDRLTNHS EVLEALSQAL RKTEEAYLDT
401: ADKMLDENPE LALMGSCVLV MLMKGEDIYV MNVGDSRAVL GQKSEPDYWL AKIRQDLERI NEETMMNDLE GCEGDQSSLV PNLSAFQLTV DHSTNIEEEV
501: ERIRNEHPDD VTAVTNERVK GSLKVTRAFG AGFLKQPKWN NALLEMFQID YVGKSPYINC LPSLYHHRLG SKDRFLILSS DGLYQYFTNE EAVSEVELFI
601: TLQPEGDPAQ HLVQELLFRA AKKAGMDFHE LLEIPQGERR RYHDDVSIVV ISLEGRMWKS CV

Arabidopsis Description

PLL5PLL5 [Source:UniProtKB/TrEMBL;Acc:A0A178WGF5]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.