Factsheet for TraesCS4B01G254700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G177600.1
TraesCS1B01G202600.1
TraesCS1D01G176100.1
TraesCS2A01G430400.1
TraesCS2B01G451000.1
TraesCS2D01G428000.1
TraesCS6A01G115700.1
TraesCS6B01G143500.1
TraesCS6D01G104500.1
TraesCS7A01G418100.1
TraesCS7B01G318200.1
TraesCS7D01G411100.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G33920.1	TraesCS2A01G430400.1	AT2G24400.1	21798944
AT4G33920.1	TraesCS2B01G451000.1	AT2G24400.1	21798944
AT4G33920.1	TraesCS2D01G428000.1	AT2G24400.1	21798944
AT4G33920.1	TraesCS6A01G115700.1	AT2G24400.1	21798944
AT4G33920.1	TraesCS6B01G143500.1	AT2G24400.1	21798944
AT4G33920.1	TraesCS6D01G104500.1	AT2G24400.1	21798944
AT4G33920.1	TraesCS7A01G418100.1	AT2G24400.1	21798944
AT4G33920.1	TraesCS7B01G318200.1	AT2G24400.1	21798944
AT4G33920.1	TraesCS7D01G411100.1	AT2G24400.1	21798944
AT4G33920.1	TraesCS1A01G177600.1	AT4G39050.1	21798944
AT4G33920.1	TraesCS1B01G202600.1	AT4G39050.1	21798944
AT4G33920.1	TraesCS1D01G176100.1	AT4G39050.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G254500.1	Wheat	mitochondrion, nucleus, plastid, vacuole	89.67	98.2
TraesCS4A01G050000.1	Wheat	plastid	94.6	94.16
HORVU4Hr1G069380.3	Barley	peroxisome	44.37	79.08
Os03t0207400-01	Rice	mitochondrion	69.01	75.0
EER95306	Sorghum	mitochondrion	68.78	74.74
Zm00001d048131_P001	Maize	cytosol	67.61	73.66
KRG91074	Soybean	cytosol, mitochondrion	51.64	58.98
VIT_03s0091g00470.t01	Wine grape	mitochondrion	52.35	58.53
Solyc01g107300.2.1	Tomato	cytosol	31.46	58.52
KRH35699	Soybean	mitochondrion	51.88	58.47
PGSC0003DMT400013942	Potato	cytosol, mitochondrion	50.0	57.41
VIT_07s0129g00520.t01	Wine grape	cytosol	51.17	56.77
Solyc10g049630.1.1	Tomato	mitochondrion, nucleus	50.47	56.58
KRH28403	Soybean	cytosol	49.53	56.27
KRH77072	Soybean	cytosol	49.53	55.97
Solyc02g092750.2.1	Tomato	cytosol	47.89	55.74
PGSC0003DMT400066175	Potato	cytosol	49.06	55.73
Bra036972.1-P	Field mustard	mitochondrion	48.83	55.62
TraesCS5B01G078500.1	Wheat	mitochondrion	50.0	55.61
PGSC0003DMT400064207	Potato	cytosol	48.36	55.38
CDY28332	Canola	mitochondrion	49.77	55.21
CDY49385	Canola	mitochondrion	48.36	55.08
CDX72438	Canola	mitochondrion	48.36	55.08
Bra034592.1-P	Field mustard	mitochondrion	49.77	55.06
CDY51944	Canola	mitochondrion	49.77	55.06
VIT_18s0001g09390.t01	Wine grape	mitochondrion	48.36	54.5
AT4G33920.1	Thale cress	mitochondrion	48.36	54.21
TraesCS5B01G404000.2	Wheat	mitochondrion	46.95	53.19
Solyc01g107310.2.1	Tomato	mitochondrion	20.89	48.11
TraesCS2B01G478400.2	Wheat	cytosol, mitochondrion, peroxisome, plastid	41.08	44.87
TraesCS1B01G218900.1	Wheat	cytosol, peroxisome, plastid	40.61	44.13
TraesCS3B01G604000.1	Wheat	mitochondrion	39.91	44.04
TraesCS5B01G510000.1	Wheat	cytosol, mitochondrion	38.5	42.93
TraesCS7B01G455500.1	Wheat	mitochondrion	39.2	42.6
TraesCS4B01G335500.1	Wheat	mitochondrion	38.97	41.5
TraesCS4B01G382400.1	Wheat	cytosol	15.02	27.12
TraesCS3B01G094100.1	Wheat	cytosol	40.14	22.24
TraesCS2B01G307000.1	Wheat	nucleus	22.54	18.5
TraesCS6B01G290600.1	Wheat	plastid	23.0	16.42
TraesCS5B01G492700.1	Wheat	mitochondrion, plastid	23.24	15.79
TraesCS4B01G381900.1	Wheat	plastid	22.54	15.76
TraesCS1B01G042100.1	Wheat	mitochondrion, nucleus, peroxisome, plastid	17.84	12.18

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	InterPro:IPR001932	InterPro:IPR036457
PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF361	SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606
EnsemblPlantsGene:TraesCS4B01G254700	EnsemblPlants:TraesCS4B01G254700.1	TIGR:cd00143	SEG:seg	:	:

Description

No Description!

Coordinates

chr4B:-:519823400..519824805

Molecular Weight (calculated)

45715.4 Da

IEP (calculated)

8.721

GRAVY (calculated)

-0.270

Length

426 amino acids

Sequence
(BLAST)

001: MSTPSHPPER LSHSHPTRHS LPRSSFTSPH GRPRCRGMRG SRWCCCCFGG GGGGAGRSGS VADDGLVWDV GLKAHASGEY SVAVAQANEA LEDQAQVLVS
101: PAATLVGVYD GHGGPDAARF VNARLFSLIQ EFASQSGGLS AQVIKRAFGA TEEAFMGMVE KSWPSQPRLL SVGSCCLVGA IEDGTLHVAN LGDSRAVLGR
201: LASTGGKKRR AVVAERLSRD HNVADEEVRR EVAEAHPDDP HIVMSSHGVW RIKGIIQVSR SIGDAYLKRP DLCSPAVMQS LCPFPLRRPV MSAVPSVTSR
301: RLRPGDQFII FASDGLWEQL SDEAAVGIVS RSPRKGVAMR LVRAAQLEAA RKKDIKYESI AAIEKGRRRR FHDDITVVVL FLDNRCEGTP QPTASAGGID
401: GTRAPVDVFS LGPDDHGDDP TRPVLR

Best Arabidopsis Sequence Match ( AT3G51370.1 )
(BLAST)

001: MLSTLMKLLS ACLWPSSSSG KSSDSTGKQD GLLWYKDFGQ HLVGEFSMAV VQANNLLEDQ SQVESGPLST LDSGPYGTFI GIYDGHGGPE TSRFVNDHLF
101: QHLKRFAAEQ ASMSVDVIKK AYEATEEGFL GVVTKQWPTK PQIAAVGSCC LVGVICGGML YIANVGDSRA VLGRAMKATG EVIALQLSAE HNVSIESVRQ
201: EMHSLHPDDS HIVMLKHNVW RVKGLIQISR SIGDVYLKKA EFNKEPLYTK YRIREPFKRP ILSGEPTITE HEIQPQDKFL IFASDGLWEQ MSNQEAVDIV
301: QNHPRNGIAR RLVKMALQEA AKKREMRYSD LKKIERGVRR HFHDDITVVI IFLDTNQVSS VKGPPLSIRG GGMTFPKKI

Arabidopsis Description

Probable protein phosphatase 2C 46 [Source:UniProtKB/Swiss-Prot;Acc:Q9SD12]
SUBAcon: [extracellular,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.