Factsheet for TraesCS5B01G404000.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G408500.1	Wheat	mitochondrion	98.14	99.19
TraesCS5A01G398900.1	Wheat	mitochondrion	97.87	96.84
KXG37497	Sorghum	mitochondrion	85.11	84.88
Zm00001d013220_P001	Maize	mitochondrion	82.45	84.47
Os03t0761100-01	Rice	mitochondrion	85.11	84.21
Zm00001d034109_P001	Maize	mitochondrion	83.78	83.78
HORVU5Hr1G097060.3	Barley	plastid	86.44	83.55
TraesCS5B01G078500.1	Wheat	mitochondrion	58.51	57.44
TraesCS2B01G478400.2	Wheat	cytosol, mitochondrion, peroxisome, plastid	48.94	47.18
TraesCS4B01G254700.1	Wheat	plastid	53.19	46.95
TraesCS4B01G335500.1	Wheat	mitochondrion	48.67	45.75
TraesCS3B01G604000.1	Wheat	mitochondrion	46.81	45.6
TraesCS1B01G218900.1	Wheat	cytosol, peroxisome, plastid	46.81	44.9
TraesCS7B01G455500.1	Wheat	mitochondrion	45.74	43.88
TraesCS5B01G510000.1	Wheat	cytosol, mitochondrion	43.88	43.19
TraesCS4B01G382400.1	Wheat	cytosol	16.49	26.27
TraesCS3B01G094100.1	Wheat	cytosol	43.62	21.33
TraesCS2B01G307000.1	Wheat	nucleus	25.27	18.3
TraesCS6B01G290600.1	Wheat	plastid	27.39	17.25
TraesCS5B01G492700.1	Wheat	mitochondrion, plastid	26.33	15.79
TraesCS4B01G381900.1	Wheat	plastid	25.27	15.6
TraesCS1B01G042100.1	Wheat	mitochondrion, nucleus, peroxisome, plastid	18.88	11.38

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	InterPro:IPR001932	InterPro:IPR036457
PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF292	SMART:SM00332	SUPFAM:SSF81606	EnsemblPlantsGene:TraesCS5B01G404000
EnsemblPlants:TraesCS5B01G404000.2	TIGR:cd00143	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5B:-:580364530..580366761

Molecular Weight (calculated)

41016.9 Da

IEP (calculated)

9.421

GRAVY (calculated)

-0.217

Length

376 amino acids

Sequence
(BLAST)

001: MLRAVARCCG HWPPGAAAAD GMLWQTELRP HAAGEFSMAA AQANLVMEDQ AQVLASPAAT LVGVYDGHGG PDASRFLRSA LFPHVQRFAR EQGGVTAEAI
101: RRAFGAAEED FLHEVRQAWP KRPRMAAVGS CCLLGAIAGD TLYVANLGDS RAVLGRRVVG GGVAVAERLS TDHNVASEEV RMEVSSHNPD DAQIVVHTRG
201: AWRIKGIIQV SRSIGDVYLK KPEYSLDPLF RQIGPVIALK RPALSAEPQI HVRKLKPNDQ FIIFASDGLW EHLSDDAAVQ IVFKNPRTVG SNGIANRLVR
301: AALKEATKKR EVSVHDLRTI ERGVRRHFHD DISVVVVYLD RHRGRRQTRV VDSSSNCTSA PVDIYSSSSS AYRDSG

Best Arabidopsis Sequence Match ( AT3G51370.1 )
(BLAST)

001: MLSTLMKLLS ACLWPSSSSG KSSDSTGKQD GLLWYKDFGQ HLVGEFSMAV VQANNLLEDQ SQVESGPLST LDSGPYGTFI GIYDGHGGPE TSRFVNDHLF
101: QHLKRFAAEQ ASMSVDVIKK AYEATEEGFL GVVTKQWPTK PQIAAVGSCC LVGVICGGML YIANVGDSRA VLGRAMKATG EVIALQLSAE HNVSIESVRQ
201: EMHSLHPDDS HIVMLKHNVW RVKGLIQISR SIGDVYLKKA EFNKEPLYTK YRIREPFKRP ILSGEPTITE HEIQPQDKFL IFASDGLWEQ MSNQEAVDIV
301: QNHPRNGIAR RLVKMALQEA AKKREMRYSD LKKIERGVRR HFHDDITVVI IFLDTNQVSS VKGPPLSIRG GGMTFPKKI

Arabidopsis Description

Probable protein phosphatase 2C 46 [Source:UniProtKB/Swiss-Prot;Acc:Q9SD12]
SUBAcon: [extracellular,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.