Factsheet for PGSC0003DMT400067223

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
peroxisome 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g065920.2.1	Tomato	nucleus	89.84	89.84
VIT_05s0077g00830.t01	Wine grape	extracellular	76.47	77.3
KRH50715	Soybean	mitochondrion, peroxisome, plastid	73.53	73.53
KRH02370	Soybean	cytosol, extracellular, plastid	73.53	73.33
CDY34992	Canola	cytosol, plastid, vacuole	71.93	71.16
CDY39026	Canola	cytosol, plastid, vacuole	71.93	71.16
Bra021218.1-P	Field mustard	plastid	71.66	70.9
KRH36962	Soybean	cytosol	70.59	70.59
CDX75902	Canola	plastid	71.12	70.56
KRH11926	Soybean	cytosol	70.05	70.43
AT3G17090.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	71.93	70.05
GSMUA_Achr11P...	Banana	mitochondrion	67.38	66.67
GSMUA_Achr2P02070_001	Banana	mitochondrion	65.24	65.59
HORVU5Hr1G116740.1	Barley	cytosol, peroxisome	47.86	62.59
HORVU4Hr1G020150.2	Barley	peroxisome	48.4	57.1
Os03t0832400-01	Rice	plasma membrane	58.56	56.74
Zm00001d034738_P001	Maize	mitochondrion	57.49	56.73
EER90579	Sorghum	cytosol, mitochondrion, peroxisome, plastid	57.49	56.28
TraesCS4A01G363400.1	Wheat	mitochondrion	57.22	56.17
PGSC0003DMT400068706	Potato	mitochondrion	56.95	55.61
TraesCS5B01G510000.1	Wheat	cytosol, mitochondrion	56.68	55.5
TraesCS5D01G510100.1	Wheat	plastid	56.95	55.32
PGSC0003DMT400009248	Potato	mitochondrion	57.49	55.13
PGSC0003DMT400046486	Potato	mitochondrion	56.68	54.64
PGSC0003DMT400058098	Potato	mitochondrion	55.62	52.39
PGSC0003DMT400005115	Potato	cytosol	52.94	52.38
PGSC0003DMT400028715	Potato	cytosol	52.14	51.86
PGSC0003DMT400060005	Potato	cytosol	52.67	51.3
PGSC0003DMT400013942	Potato	cytosol, mitochondrion	48.66	49.06
PGSC0003DMT400066175	Potato	cytosol	47.59	47.47
PGSC0003DMT400064207	Potato	cytosol	44.38	44.62
TraesCS5A01G478600.1	Wheat	cytosol	40.37	42.9
PGSC0003DMT400029771	Potato	cytosol, mitochondrion, peroxisome	43.85	42.49
PGSC0003DMT400029765	Potato	mitochondrion	41.71	38.14
PGSC0003DMT400029763	Potato	cytosol, mitochondrion	39.57	37.95
PGSC0003DMT400029770	Potato	mitochondrion	37.43	32.86
PGSC0003DMT400029776	Potato	cytosol	14.44	29.35
TraesCS3B01G094100.1	Wheat	cytosol	51.87	25.23
PGSC0003DMT400029441	Potato	cytosol, nucleus, peroxisome	25.67	18.43
PGSC0003DMT400011807	Potato	nucleus	24.06	18.15
PGSC0003DMT400049278	Potato	cytosol, nucleus, peroxisome	27.01	16.83
PGSC0003DMT400022788	Potato	cytosol, nucleus, peroxisome	25.94	15.37
PGSC0003DMT400078173	Potato	nucleus	27.81	14.61
PGSC0003DMT400052881	Potato	nucleus	28.61	13.7
PGSC0003DMT400045127	Potato	nucleus	29.14	13.66
PGSC0003DMT400022786	Potato	cytosol, nucleus, peroxisome	7.49	8.24

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:102581887	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169
GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	UniProt:M1CGX1	PFAM:PF00481	EnsemblPlantsGene:PGSC0003DMG400026140
PGSC:PGSC0003DMG400026140	EnsemblPlants:PGSC0003DMT400067223	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF325	SMART:SM00332	SUPFAM:SSF81606
UniParc:UPI00029568A5	RefSeq:XP_006353672.1	SEG:seg	:	:	:

Description

Protein phosphatase 2c [Source:PGSC_GENE;Acc:PGSC0003DMG400026140]

Coordinates

chr6:+:45802961..45808623

Molecular Weight (calculated)

41499.8 Da

IEP (calculated)

8.414

GRAVY (calculated)

-0.233

Length

374 amino acids

Sequence
(BLAST)

001: MNFLPRCLSY SKCSGGAGRS EIRGGESSNG GFGKDGLLWF HDIGNCGSGE YSMAIVQANQ VLEDQSQIES GPFGTFVGVY DGHGGPETAR YVCDHLFRHF
101: QAISAEGNGV VTEETIQRAF LETERGFTSV VSENWHSRPQ LATVGGCCLV GAIYQQTLFV ANLGDSRVVL GKKVGNTGEI AAIQLSTEHN ANIESVRWEL
201: KDLHPNDPQI VVLRHGVWRV KGIIQVSRSI GDVYLKHTRF CREPINGKFR VPPPLNMPIL LATPTILKHP LHPNDSFLIF ASDGLWEHLS NEKAVEIVKS
301: HPRKGSAKRL VKAALHVAAK KREMRYSDLR NIDKKVRRHF HDDITVIILF LNHDLICRGV VQDPTLSIRS ALEH

Best Arabidopsis Sequence Match ( AT3G17090.1 )
(BLAST)

001: MSGSLMNLFS LCFKPFGHVC DNSEAGSGGG GGVSGGTGGE GKDGLLWFRD LGKYCGGDFS MAVIQANQVL EDQSQVESGN FGTFVGVYDG HGGPEAARYV
101: CDHLFNHFRE ISAETQGVVT RETIERAFHA TEEGFASIVS ELWQEIPNLA TVGTCCLVGV IYQNTLFVAS LGDSRVVLGK KGNCGGLSAI QLSTEHNANN
201: EDIRWELKDL HPDDPQIVVF RHGVWRVKGI IQVSRSIGDM YMKRPEFNKE PISQKFRIAE PMKRPLMSAT PTILSHPLHP NDSFLIFASD GLWEHLTNEK
301: AVEIVHNHPR AGSAKRLIKA ALHEAARKRE MRYSDLRKID KKVRRHFHDD ITVIVVFLNH DLISRGHINS TQDTTVSIRS ALEH

Arabidopsis Description

Probable protein phosphatase 2C 42 [Source:UniProtKB/Swiss-Prot;Acc:Q0V7V2]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.