Factsheet for TraesCS4A01G363400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G510100.1	Wheat	plastid	97.9	96.88
HORVU5Hr1G116740.1	Barley	cytosol, peroxisome	72.18	96.15
TraesCS5B01G510000.1	Wheat	cytosol, mitochondrion	96.06	95.81
HORVU4Hr1G020150.2	Barley	peroxisome	73.49	88.33
EER90579	Sorghum	cytosol, mitochondrion, peroxisome, plastid	77.43	77.23
Zm00001d034738_P001	Maize	mitochondrion	76.64	77.04
Os03t0832400-01	Rice	plasma membrane	76.64	75.65
GSMUA_Achr11P...	Banana	mitochondrion	63.25	63.76
GSMUA_Achr2P02070_001	Banana	mitochondrion	62.2	63.71
VIT_05s0077g00830.t01	Wine grape	extracellular	61.15	62.97
KRH50715	Soybean	mitochondrion, peroxisome, plastid	58.53	59.63
KRH02370	Soybean	cytosol, extracellular, plastid	58.53	59.47
CDX75902	Canola	plastid	58.79	59.42
Bra021218.1-P	Field mustard	plastid	58.79	59.26
CDY34992	Canola	cytosol, plastid, vacuole	58.53	58.99
CDY39026	Canola	cytosol, plastid, vacuole	58.53	58.99
KRH11926	Soybean	cytosol	57.48	58.87
KRH36962	Soybean	cytosol	57.22	58.29
AT3G17090.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	58.53	58.07
PGSC0003DMT400067223	Potato	mitochondrion	56.17	57.22
Solyc06g065920.2.1	Tomato	nucleus	50.66	51.6
TraesCS3A01G538500.1	Wheat	mitochondrion	50.66	50.0
TraesCS2A01G456300.2	Wheat	cytosol, mitochondrion, peroxisome, plastid	50.66	49.49
TraesCS7A01G537000.1	Wheat	mitochondrion	50.66	49.23
TraesCS1A01G205300.2	Wheat	cytosol, peroxisome, plastid	50.13	48.72
TraesCS5A01G505300.1	Wheat	mitochondrion	50.39	48.12
TraesCS5A01G478600.1	Wheat	cytosol	43.31	46.88
TraesCS5A01G072500.1	Wheat	mitochondrion	44.62	44.39
TraesCS5A01G398900.1	Wheat	mitochondrion	42.26	42.37
TraesCS7A01G386400.1	Wheat	cytosol	15.49	42.14
TraesCS4A01G050000.1	Wheat	plastid	42.52	37.85
TraesCS2A01G290500.1	Wheat	nucleus	27.03	19.85
TraesCS6A01G263600.1	Wheat	plastid	27.56	17.59
TraesCS1A01G033700.1	Wheat	mitochondrion	25.46	16.22
TraesCS5A01G479600.1	Wheat	plastid	25.98	15.49
TraesCS5A01G547900.1	Wheat	cytosol, nucleus, peroxisome	24.41	15.3

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481
InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF325
SMART:SM00332	SUPFAM:SSF81606	EnsemblPlantsGene:TraesCS4A01G363400	EnsemblPlants:TraesCS4A01G363400.1	TIGR:cd00143	SEG:seg

Description

No Description!

Coordinates

chr4A:-:636656163..636658658

Molecular Weight (calculated)

41123.8 Da

IEP (calculated)

6.717

GRAVY (calculated)

-0.166

Length

381 amino acids

Sequence
(BLAST)

001: MLGGLLRFLS ACGGSWQTSP APPHAAPPPP SDPSSDASEG RDGLLWWRDL ARCAAGDVSA ALVQANQTLE DQCRIHSAPP LGTVLAVLDG HAGHAAARFA
101: CDHLVPTLLE AASGPGGVTA DAIRDAFAAT EAAFIAQVSS QWDTNPDLAT VGSCCLVGVV HEQTLFVANL GDSRAVLGKK VGRSGQIVAE QLSAEHNAND
201: EAVRQELMAQ HPDDPQIVAL KHGVWRVKGI IQVSRSLGDA YLKDAKYNTD RIKPKFRVSE PFSRPIMSAE PTIVSHSLEP SDCFVIFASD GLWEHLTNQE
301: AVEIVHNNQR AGSAKRLIKA ALQEAARKRE MRYSDLMRID KKVRRHFHDD ITVIVLFINH ELLAKGNAQV PPLSIRSALD H

Best Arabidopsis Sequence Match ( AT3G17090.1 )
(BLAST)

001: MSGSLMNLFS LCFKPFGHVC DNSEAGSGGG GGVSGGTGGE GKDGLLWFRD LGKYCGGDFS MAVIQANQVL EDQSQVESGN FGTFVGVYDG HGGPEAARYV
101: CDHLFNHFRE ISAETQGVVT RETIERAFHA TEEGFASIVS ELWQEIPNLA TVGTCCLVGV IYQNTLFVAS LGDSRVVLGK KGNCGGLSAI QLSTEHNANN
201: EDIRWELKDL HPDDPQIVVF RHGVWRVKGI IQVSRSIGDM YMKRPEFNKE PISQKFRIAE PMKRPLMSAT PTILSHPLHP NDSFLIFASD GLWEHLTNEK
301: AVEIVHNHPR AGSAKRLIKA ALHEAARKRE MRYSDLRKID KKVRRHFHDD ITVIVVFLNH DLISRGHINS TQDTTVSIRS ALEH

Arabidopsis Description

Probable protein phosphatase 2C 42 [Source:UniProtKB/Swiss-Prot;Acc:Q0V7V2]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.