Factsheet for TraesCS5A01G547900.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G357800.1	Wheat	cytosol, nucleus, peroxisome	90.62	91.07
TraesCS4B01G381900.1	Wheat	plastid	84.54	84.4
TraesCS4B01G382400.1	Wheat	cytosol	31.91	82.2
HORVU4Hr1G090650.1	Barley	cytosol, nucleus, peroxisome, plastid	75.33	74.71
Zm00001d028615_P001	Maize	nucleus	59.05	57.62
Zm00001d047807_P001	Maize	cytosol	57.73	57.17
EER95099	Sorghum	cytosol, nucleus, peroxisome, plastid	57.57	56.73
Os03t0275100-02	Rice	cytosol, peroxisome, plastid	58.55	56.42
OQU92823	Sorghum	plastid	47.04	53.26
TraesCS5A01G479600.1	Wheat	plastid	40.62	38.65
TraesCS1A01G033700.1	Wheat	mitochondrion	35.36	35.95
TraesCS6A01G263600.1	Wheat	plastid	34.7	35.34
TraesCS7A01G386400.1	Wheat	cytosol	6.91	30.0
TraesCS7A01G537000.1	Wheat	mitochondrion	19.08	29.59
TraesCS2A01G290500.1	Wheat	nucleus	24.84	29.09
TraesCS1A01G205300.2	Wheat	cytosol, peroxisome, plastid	18.09	28.06
TraesCS3A01G538500.1	Wheat	mitochondrion	17.76	27.98
TraesCS5A01G505300.1	Wheat	mitochondrion	17.43	26.57
TraesCS2A01G456300.2	Wheat	cytosol, mitochondrion, peroxisome, plastid	16.28	25.38
TraesCS4A01G363400.1	Wheat	mitochondrion	15.3	24.41
TraesCS5A01G072500.1	Wheat	mitochondrion	15.13	24.02
TraesCS5A01G398900.1	Wheat	mitochondrion	14.97	23.95
TraesCS5A01G478600.1	Wheat	cytosol	12.5	21.59
TraesCS4A01G050000.1	Wheat	plastid	13.98	19.86

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.3	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF382	SMART:SM00332
SUPFAM:SSF81606	EnsemblPlantsGene:TraesCS5A01G547900	EnsemblPlants:TraesCS5A01G547900.1	TIGR:cd00143	SEG:seg	:

Description

No Description!

Coordinates

chr5A:-:702138473..702141043

Molecular Weight (calculated)

66590.8 Da

IEP (calculated)

6.582

GRAVY (calculated)

-0.357

Length

608 amino acids

Sequence
(BLAST)

001: MGNGISKNTC FSGETYAPAV SSDPVPNDIH GQSFKYVPIV VAFDKSPMAN MLSSKTPFLS LFGAAINANQ ATSSSIPSFR LLNELMVPQS SVCTVKSSCS
101: SAAAPVQDQP TRLSFSGHFL DSSGTVSTIS NQLSRRPFMS GMLDHSFSSS SSFFSHRDSV SHPMNEHDAI GSQCCNEQPL EKSLATAGSR LDFSVPRNNL
201: LSKGPTEVSN MDSLGDGDHR SPPSDNVQWA QGMAGEDRFQ VAVSEECGWV FVGIYDGFLG PDATDYLFAN LHVAVNHTLK GVLSDNIQCN EPTTNSDNLF
301: CLNGGIHSPE FERKPAKRGR TEHPEKNNSA MSGGSPTIHQ RVLRALGQAL RETEEAFLAA EEGAADNPEI GLMGSCVLVM LMKGENVYVM NVGNSRAVLA
401: RRPWPNLNNI LGKATEKDLQ QLKAEIMDGL QPVQLNAEHS TSIEEEVKRI KAEHNDSNAI IHGRVKGKLN ITRAFGAGYL KEPKWNSMLL ASFKIDYIGK
501: DPYINCIPSL HHHCIGPNDK FLVLSSDGLY QYFTNKEVVD EAEMFTTVYP KGNPAEHLIK EVLLRAARKA GMDYHELLKI SHDERRKYHD DISVMVISFK
601: GRMGRSSV

Best Arabidopsis Sequence Match ( AT3G09400.2 )
(BLAST)

001: MGNGVASFSG CCAGTTAGEI SGRYVTGVGL VQENLGHSFC YVRPVLTGSK SSFPPEPPLR PDPIPGTTTT FRSISGASVS ANTSTALSTS LSTDTSGIAS
101: AFESSNRFAS LPLQPVPRSP IKKSDHGSGL FERRFLSGPI ESGLVSGKKT KEKAKLKKSG SKSFTKPKLK KSESKIFTFK NVFTNLSCSK KSVIKPINGF
201: DSFDGSSDTD RYIPEINSLS TIVSSHEKPR IKEEEDKTES ALEEPKIQWA QGKAGEDRVH VILSEENGWL FVGIYDGFSG PDPPDYLIKN LYTAVLRELK
301: GLLWIDKGES YNRNGESNIE KQSTVEHASD SDQENCPVMN GNDVACGSRN ITSDVKKLQW RCEWEHNSSN KSNNINHKDV LRALQQALEK TEESFDLMVN
401: ENPELALMGS CVLVTLMKGE DVYVMSVGDS RAVLARRPNV EKMKMQKELE RVKEESPLET LFITERGLSL LVPVQLNKEH STSVEEEVRR IKKEHPDDIL
501: AIENNRVKGY LKVTRAFGAG FLKQPKWNEA LLEMFRIDYV GTSPYITCSP SLHHHRLSSR DKFLILSSDG LYEYFSNEEA IFEVDSFISA FPEGDPAQHL
601: IQEVLLRAAK KYGNTKNKTQ THLRFETQSL IKLTCIFFFF

Arabidopsis Description

PLL3Probable protein phosphatase 2C 36 [Source:UniProtKB/Swiss-Prot;Acc:Q9SR24]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.