Factsheet for PGSC0003DMT400005115

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g007080.2.1	Tomato	cytosol	95.77	95.77
PGSC0003DMT400028715	Potato	cytosol	79.63	80.05
VIT_08s0040g02970.t01	Wine grape	cytosol	74.87	74.67
PGSC0003DMT400060005	Potato	cytosol	69.31	68.23
GSMUA_Achr10P...	Banana	cytosol	67.46	67.82
GSMUA_Achr6P23480_001	Banana	cytosol	57.94	65.57
KRH67612	Soybean	cytosol	61.9	65.55
KRH19775	Soybean	cytosol	64.29	65.5
KRH32367	Soybean	cytosol	64.29	65.5
KRG95894	Soybean	cytosol	63.76	65.14
GSMUA_Achr6P15470_001	Banana	mitochondrion	65.08	64.91
PGSC0003DMT400046486	Potato	mitochondrion	65.61	63.92
PGSC0003DMT400009248	Potato	mitochondrion	65.61	63.59
TraesCS3A01G538500.1	Wheat	mitochondrion	64.81	63.47
Os01t0976700-01	Rice	mitochondrion	62.7	63.03
TraesCS3D01G544100.1	Wheat	mitochondrion	64.29	62.95
TraesCS3B01G604000.1	Wheat	mitochondrion	64.29	62.95
PGSC0003DMT400068706	Potato	mitochondrion	63.49	62.66
HORVU3Hr1G117670.6	Barley	mitochondrion	64.55	61.77
HORVU3Hr1G114160.1	Barley	mitochondrion	50.79	61.74
PGSC0003DMT400058098	Potato	mitochondrion	64.55	61.46
TraesCS7A01G386400.1	Wheat	cytosol	20.63	55.71
PGSC0003DMT400067223	Potato	mitochondrion	52.38	52.94
PGSC0003DMT400013942	Potato	cytosol, mitochondrion	49.21	50.13
PGSC0003DMT400066175	Potato	cytosol	49.21	49.6
HORVU2Hr1G009490.1	Barley	mitochondrion	20.11	48.1
PGSC0003DMT400064207	Potato	cytosol	47.09	47.85
PGSC0003DMT400029771	Potato	cytosol, mitochondrion, peroxisome	42.59	41.71
PGSC0003DMT400029763	Potato	cytosol, mitochondrion	39.68	38.46
PGSC0003DMT400029765	Potato	mitochondrion	39.95	36.92
PGSC0003DMT400029770	Potato	mitochondrion	36.77	32.63
PGSC0003DMT400029776	Potato	cytosol	15.34	31.52
PGSC0003DMT400049278	Potato	cytosol, nucleus, peroxisome	32.01	20.17
PGSC0003DMT400029441	Potato	cytosol, nucleus, peroxisome	27.25	19.77
PGSC0003DMT400011807	Potato	nucleus	25.66	19.56
PGSC0003DMT400022788	Potato	cytosol, nucleus, peroxisome	30.16	18.07
PGSC0003DMT400078173	Potato	nucleus	32.54	17.28
PGSC0003DMT400052881	Potato	nucleus	30.69	14.85
PGSC0003DMT400045127	Potato	nucleus	30.95	14.66
PGSC0003DMT400022786	Potato	cytosol, nucleus, peroxisome	9.52	10.59

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:102601017	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169
GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	UniProt:M0ZPI0	PFAM:PF00481	EnsemblPlantsGene:PGSC0003DMG400002022
PGSC:PGSC0003DMG400002022	EnsemblPlants:PGSC0003DMT400005115	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF367	SMART:SM00332	SUPFAM:SSF81606
UniParc:UPI0002963F99	RefSeq:XP_006345698.1	SEG:seg	:	:	:

Description

Protein phosphatase 2C 38 [Source:PGSC_GENE;Acc:PGSC0003DMG400002022]

Coordinates

chr9:-:7011383..7015493

Molecular Weight (calculated)

41862.4 Da

IEP (calculated)

9.628

GRAVY (calculated)

-0.256

Length

378 amino acids

Sequence
(BLAST)

001: MVKPCWKPSV EGDGGAGRGG DTRGRVDGLM WYKDLGVHVN GEFSMAIIQA NSLMEDQSQL ESGPLSSLES GPYGTFVGVY DGHGGPETSC FVNKTLFSNL
101: KKFATEHQEI SADVIKKAFL KTDEEFLSLV KQQWFEKPQL ASVGSCCLVG VICNGLLYIA NAGDSRVVLG RTEKASRGVT AIQLSVEHNA NNESVRDELR
201: SLHPQDSQIV LLKHKVWRVK GIIQVSKSIG DAYLKRAEFN QAPLLAKFRL PESFSKPILS AEPSIFIHRL TSKDQFLIFG SDGLWEHLSN QEAVDIVNSQ
301: PRNGIARRLI KAALRVAAKK REMRYSDLKK IDRGVRRHFH DDISVVVVFL DLYSMNRSSS HIPILSIRGG GMPASPKR

Best Arabidopsis Sequence Match ( AT3G12620.1 )
(BLAST)

001: MVSSATILRM VAPCWRRPSV KGDHSTRDAN GRCDGLLWYK DSGNHVAGEF SMSVIQANNL LEDHSKLESG PVSMFDSGPQ ATFVGVYDGH GGPEAARFVN
101: KHLFDNIRKF TSENHGMSAN VITKAFLATE EDFLSLVRRQ WQIKPQIASV GACCLVGIIC SGLLYIANAG DSRVVLGRLE KAFKIVKAVQ LSSEHNASLE
201: SVREELRSLH PNDPQIVVLK HKVWRVKGII QVSRSIGDAY LKKAEFNREP LLAKFRVPEV FHKPILRAEP AITVHKIHPE DQFLIFASDG LWEHLSNQEA
301: VDIVNTCPRN GIARKLIKTA LREAAKKREM RYSDLKKIDR GVRRHFHDDI TVIVVFLDSH LVSRSTSRRP LLSISGGGDL AGPST

Arabidopsis Description

PP2C38Probable protein phosphatase 2C 38 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHJ9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.