CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra028865.1-P	Field mustard	mitochondrion	96.67	96.67
CDY11224	Canola	cytosol	92.22	93.0
CDY55405	Canola	cytosol, nucleus, plastid	94.17	91.87
CDY10428	Canola	mitochondrion	91.39	90.63
CDX70348	Canola	cytosol, mitochondrion	90.83	90.08
CDY40818	Canola	mitochondrion	31.39	89.68
CDX80837	Canola	cytosol, mitochondrion	87.78	86.81
AT5G02760.1	Thale cress	cytosol, mitochondrion	86.11	83.78
CDY51276	Canola	mitochondrion	17.5	75.9
GSMUA_Achr6P15470_001	Banana	mitochondrion	63.33	60.16
CDX76124	Canola	mitochondrion	62.22	59.89
GSMUA_Achr6P23480_001	Banana	cytosol	55.56	59.88
CDY02904	Canola	mitochondrion	61.39	59.09
GSMUA_Achr10P...	Banana	cytosol	60.83	58.24
CDY42159	Canola	cytosol	60.28	57.26
CDY08420	Canola	cytosol, mitochondrion, plastid	60.0	56.99
CDX73725	Canola	vacuole	59.17	56.5
CDY51441	Canola	mitochondrion	60.56	56.33
CDX73413	Canola	mitochondrion	60.56	56.33
CDY16313	Canola	extracellular	58.89	56.23
Os01t0976700-01	Rice	mitochondrion	58.61	56.12
TraesCS3A01G538500.1	Wheat	mitochondrion	59.72	55.7
TraesCS3B01G604000.1	Wheat	mitochondrion	59.72	55.7
CDY52665	Canola	cytosol	58.61	55.67
CDY33283	Canola	plastid	58.89	55.5
CDX90277	Canola	cytosol, mitochondrion, nucleus	58.33	55.26
TraesCS3D01G544100.1	Wheat	mitochondrion	59.17	55.18
CDY50535	Canola	cytosol, mitochondrion, plastid	58.89	54.78
CDY12086	Canola	cytosol, mitochondrion, nucleus	57.5	54.47
HORVU3Hr1G114160.1	Barley	mitochondrion	46.94	54.34
HORVU3Hr1G117670.6	Barley	mitochondrion	59.17	53.92
CDY54807	Canola	nucleus, peroxisome, plastid	56.67	52.31
CDY70696	Canola	extracellular, peroxisome	45.83	50.93
CDY39026	Canola	cytosol, plastid, vacuole	52.22	49.74
CDY34992	Canola	cytosol, plastid, vacuole	52.22	49.74
CDX75902	Canola	plastid	51.94	49.6
TraesCS7A01G386400.1	Wheat	cytosol	18.89	48.57
CDY14069	Canola	cytosol, mitochondrion	50.83	46.8
CDY29015	Canola	cytosol	46.67	46.67
CDY05001	Canola	cytosol, mitochondrion	50.0	46.04
CDX72438	Canola	mitochondrion	47.5	45.72
CDY49385	Canola	mitochondrion	47.5	45.72
CDY28332	Canola	mitochondrion	47.78	44.79
CDY51944	Canola	mitochondrion	47.78	44.68
CDX70071	Canola	cytosol, mitochondrion	47.22	44.39
CDX98953	Canola	cytosol, mitochondrion	46.67	43.86
CDX78002	Canola	vacuole	58.89	42.48
HORVU2Hr1G009490.1	Barley	mitochondrion	16.94	38.61
CDY40354	Canola	cytosol	22.5	33.61
CDY71703	Canola	cytosol	14.72	26.5
CDY43107	Canola	cytosol, nucleus, peroxisome	28.33	20.82
CDX92079	Canola	cytosol, nucleus, peroxisome	27.78	20.16
CDY57256	Canola	cytosol, nucleus, peroxisome	32.5	20.03
CDY71973	Canola	cytosol, nucleus, peroxisome	28.33	19.21
CDY15623	Canola	cytosol, mitochondrion, nucleus, peroxisome	30.83	19.11
CDY68192	Canola	mitochondrion, nucleus, plastid	29.44	18.76
CDY44706	Canola	nucleus	30.56	18.58
CDY71801	Canola	cytosol	28.06	18.53
CDY59038	Canola	plastid	29.44	18.5
CDY41610	Canola	nucleus	30.28	18.35
CDX95140	Canola	cytosol, mitochondrion, nucleus	31.39	18.23
CDY06718	Canola	mitochondrion, plastid	31.67	18.07
CDY62569	Canola	nucleus	30.56	17.92
CDY07928	Canola	nucleus	31.94	17.37
CDX73980	Canola	nucleus	31.67	17.12
CDY31682	Canola	nucleus, plastid	30.83	16.69
CDX84217	Canola	nucleus, plastid	30.28	16.44
CDX80059	Canola	cytosol, nucleus, peroxisome	33.61	14.24
CDY41568	Canola	cytosol, nucleus, peroxisome	33.61	14.22

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.4	Gene3D:3.60.40.10	GO:A0A078EV57	EnsemblPlants:CDY04862
ProteinID:CDY04862	ProteinID:CDY04862.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0043169	EnsemblPlantsGene:GSBRNA2T00119579001	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481
InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746
PANTHER:PTHR13832	PANTHER:PTHR13832:SF367	SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606	TMHMM:TMhelix
UniParc:UPI0004EE6005	SEG:seg	:	:	:	:

Description

BnaAnng00440D

Coordinates

chrLK031958:+:428143..429666

Molecular Weight (calculated)

40398.2 Da

IEP (calculated)

7.954

GRAVY (calculated)

-0.401

Length

360 amino acids

Sequence
(BLAST)

001: MNKSCWRNKI SPTNNDGLTW YKDLGLHTFG EFSMAMIQAN SVMEDQCQIE SGPLTFNNLA VQGTFVGVYD GHGGPEASRF IADTIFPNLK KFASEGGEVS
101: EEVMRNAFAE TDEDFLKAVK KQWRKNPQMA SVGSCCLAGV ICNGLVYIAN AGDSRAVLGR SERGRVRAVQ LSVEHNANVE SARQELWSMH PNDPNILVMK
201: HRMWRVKGII QVTKSIGDAY LKRAEFNREP LLPKYRVAEH FTEPILSADP SVTVTRLKPE DEFMILASDG LWEHLSNQEA VDIVHSSPRQ GVARRLLKAA
301: LKEAAKKREM RYSDLQEINP GVRRHFHDDI TVVVVYLDPQ KVQANGWASQ LSVRGGYPMH

Best Arabidopsis Sequence Match ( AT5G02760.1 )
(BLAST)

001: MVKPCWRIGA GMERSKINPT KVDGLTWYKD LGLHTFGEFS MAMIQANSVM EDQCQIESGP LTFNNPTVQG TFVGVYDGHG GPEASRFIAD NIFPKLKKFA
101: SEGREISEQV ISKAFAETDK DFLKTVTKQW PTNPQMASVG SCCLAGVICN GLVYIANTGD SRAVLGRSER GGVRAVQLSV EHNANLESAR QELWSLHPND
201: PTILVMKHRL WRVKGVIQVT RSIGDAYLKR AEFNREPLLP KFRLPEHFTK PILSADPSVT ITRLSPQDEF IILASDGLWE HLSNQEAVDI VHNSPRQGIA
301: RRLLKAALKE AAKKREMRYS DLTEIHPGVR RHFHDDITVI VVYLNPHPVK TNSWASPLSI RGGYPMHSTS

Arabidopsis Description

Probable protein phosphatase 2C 67 [Source:UniProtKB/Swiss-Prot;Acc:Q501F9]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.