CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71801	Canola	cytosol	93.79	91.38
Bra041012.1-P	Field mustard	nucleus	98.12	76.84
AT2G28890.1	Thale cress	nucleus	88.89	72.17
CDY57256	Canola	cytosol, nucleus, peroxisome	75.33	68.49
CDY15623	Canola	cytosol, mitochondrion, nucleus, peroxisome	73.63	67.3
CDX95140	Canola	cytosol, mitochondrion, nucleus	78.34	67.1
CDY06718	Canola	mitochondrion, plastid	77.59	65.29
CDY40354	Canola	cytosol	26.18	57.68
VIT_06s0004g04600.t01	Wine grape	nucleus	75.52	55.39
Solyc06g076100.2.1	Tomato	nucleus	72.88	54.66
PGSC0003DMT400078173	Potato	nucleus	73.07	54.49
KRH24796	Soybean	nucleus	73.63	54.31
KRH29800	Soybean	cytosol, nucleus, plastid	73.63	54.31
CDY71703	Canola	cytosol	19.21	51.0
CDY62569	Canola	nucleus	54.61	47.23
CDY44706	Canola	nucleus	52.17	46.79
CDY41610	Canola	nucleus	51.6	46.13
CDX73980	Canola	nucleus	52.17	41.59
CDY07928	Canola	nucleus	51.6	41.39
CDY68192	Canola	mitochondrion, nucleus, plastid	41.24	38.76
CDX84217	Canola	nucleus, plastid	46.33	37.1
CDY59038	Canola	plastid	39.92	37.0
CDY31682	Canola	nucleus, plastid	45.57	36.39
CDX80059	Canola	cytosol, nucleus, peroxisome	50.85	31.76
CDY41568	Canola	cytosol, nucleus, peroxisome	50.66	31.61
CDY43107	Canola	cytosol, nucleus, peroxisome	28.44	30.82
CDX92079	Canola	cytosol, nucleus, peroxisome	28.44	30.44
CDX73725	Canola	vacuole	20.9	29.44
CDY16313	Canola	extracellular	20.72	29.18
CDX76124	Canola	mitochondrion	20.34	28.88
CDY33283	Canola	plastid	20.72	28.8
CDY02904	Canola	mitochondrion	20.15	28.61
CDY04862	Canola	cytosol, mitochondrion, plastid	19.21	28.33
CDY11224	Canola	cytosol	18.83	28.01
CDY55405	Canola	cytosol, nucleus, plastid	19.4	27.91
CDY51441	Canola	mitochondrion	20.34	27.91
CDX73413	Canola	mitochondrion	20.34	27.91
CDX90277	Canola	cytosol, mitochondrion, nucleus	19.96	27.89
CDY10428	Canola	mitochondrion	19.02	27.82
CDX70348	Canola	cytosol, mitochondrion	19.02	27.82
CDY12086	Canola	cytosol, mitochondrion, nucleus	19.77	27.63
CDX80837	Canola	cytosol, mitochondrion	18.83	27.47
CDY52665	Canola	cytosol	19.21	26.91
CDY50535	Canola	cytosol, mitochondrion, plastid	19.59	26.87
CDY54807	Canola	nucleus, peroxisome, plastid	19.59	26.67
CDY42159	Canola	cytosol	19.02	26.65
CDX70071	Canola	cytosol, mitochondrion	19.21	26.63
CDX98953	Canola	cytosol, mitochondrion	19.21	26.63
CDY08420	Canola	cytosol, mitochondrion, plastid	18.83	26.39
CDY14069	Canola	cytosol, mitochondrion	19.21	26.09
CDY05001	Canola	cytosol, mitochondrion	19.21	26.09
CDX75902	Canola	plastid	18.46	25.99
CDY39026	Canola	cytosol, plastid, vacuole	18.46	25.93
CDY34992	Canola	cytosol, plastid, vacuole	18.46	25.93
CDY40818	Canola	mitochondrion	6.03	25.4
CDY51276	Canola	mitochondrion	3.77	24.1
CDY70696	Canola	extracellular, peroxisome	14.69	24.07
CDX72438	Canola	mitochondrion	16.76	23.8
CDY28332	Canola	mitochondrion	17.14	23.7
CDY51944	Canola	mitochondrion	17.14	23.64
CDY49385	Canola	mitochondrion	16.57	23.53
CDX78002	Canola	vacuole	20.9	22.24
CDY29015	Canola	cytosol	15.07	22.22

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.3	Gene3D:3.60.40.10	GO:A0A078JWE2	UniProt:A0A078JWE2
EnsemblPlants:CDY71973	ProteinID:CDY71973	ProteinID:CDY71973.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00022837001	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481
InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF228
SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0004EE17CD	SEG:seg	:	:

Description

BnaAnng39450DBnaAnng39450D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JWE2]

Coordinates

chrLK048348:+:150..2305

Molecular Weight (calculated)

58403.4 Da

IEP (calculated)

4.601

GRAVY (calculated)

-0.437

Length

531 amino acids

Sequence
(BLAST)

001: MGNGITKLSK CFTGGGETRR KKEMKILEPD PLDEGLGHSF CYVRPDPTRV SSSKVHSEED TTTTTFRTIS GASVSANAAT PLSTSLYDPY GHIDRAAAFE
101: STTSFASIPL QPIPRSSGPI VPGSGPLERG FLSGPIERGF MSGPIDARVL RRAISKTINR GQNSINLTVN SLNFSSEGSL DDDVSLESQN LQWAQGKAGE
201: DRVHVVVSEE HGWLFVGIYD GFNGPDAPDY LLSHLYPAVH RELKGLLWDD PKLDANPSSD CVDQDSNNPC PSENCEKNQR RWRCETNGSD PDPDPNSSDV
301: LKALSEALRK TEEAYLENAD MILHENPELA LMGSCVLVML MKGEDVYLMN VGDSRAVLET MIDFDGTCEG ERAGLVPNLS AFQLTVDHST NVEEEVDRIR
401: KEHPDDASAV SNERVKGSLK VTRAFGAGFL KQPKWNNALL EMFQIDYIGT SPYINCLPAL YHHRLGSKDQ FLILSSDGLY QYFTNEEAVS EVELFITLQP
501: EGDPAQHLVQ ELLFRAAKKA GNISKNLDDI L

Best Arabidopsis Sequence Match ( AT2G28890.1 )
(BLAST)

001: MGNGIGKLSK CLTGGAGRNK KPELSILEPD PLDEGLGHSF CYVRPDPTRV SSSKVHSEEE TTTFRTISGA SVSANTATPL STSLYDPYGH IDRAAAFEST
101: TSFSSIPLQP IPRSSGPIVP GSGPLERGFL SGPIERGFMS GPLDGSSGPI DGKTGSDQFQ RSFSHGLANL RVGSRKGSLV RVLRRAISKT ITRGQNSIVA
201: PIKPVKEPDW VFGSDKTRIH QIENNLTVNS LNFSSEGSLL DDDVSLESQN LQWAQGKAGE DRVHVVVSEE HGWLFVGIYD GFNGPDAPDY LLSHLYPAVH
301: RELKGLLWDD PKTDAKSSDE ADVENRDSSS EKKSKNWEES QRRWRCEWDR DLDRLLKDRS NGLDLDPDPN SSDVLKALSQ ALRKTEEAYL ENADMMLDEN
401: PELALMGSCV LVMLMKGEDV YLMNVGDSRA VLGQKAESDY WIGKIKQDLE RINEETMNDF DGCGDGEGAS LVPTLSAFQL TVDHSTNVEE EVNRIRKEHP
501: DDASAVSNER VKGSLKVTRA FGAGFLKQPK WNNALLEMFQ IDYKGTSPYI NCLPSLYHHR LGSKDQFLIL SSDGLYQYFT NEEAVSEVEL FITLQPEGDP
601: AQHLVQELLF RAAKKAGMDF HELLEIPQGE RRRYHDDVSI VVISLEGRMW KSCV

Arabidopsis Description

PLL4Probable protein phosphatase 2C 23 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZV25]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.