Skip to main content
crop-pal logo
Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 3
  • mitochondrion 4
  • peroxisome 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400028715 Potato cytosol 96.81 96.81
Solyc09g007080.2.1 Tomato cytosol 78.46 78.04
VIT_08s0040g02970.t01 Wine grape cytosol 71.81 71.24
GSMUA_Achr6P23480_001 Banana cytosol 59.31 66.77
Solyc10g055650.1.1 Tomato cytosol 59.84 66.37
Solyc05g055980.2.1 Tomato cytosol 55.32 66.24
GSMUA_Achr10P... Banana cytosol 65.96 65.96
Solyc01g111730.2.1 Tomato cytosol, mitochondrion, plastid 67.29 65.21
KRH67612 Soybean cytosol 61.44 64.71
GSMUA_Achr6P15470_001 Banana mitochondrion 64.89 64.38
TraesCS3A01G538500.1 Wheat mitochondrion 65.96 64.25
TraesCS3B01G604000.1 Wheat mitochondrion 65.43 63.73
HORVU3Hr1G114160.1 Barley mitochondrion 52.66 63.67
KRG95894 Soybean cytosol 62.5 63.51
TraesCS3D01G544100.1 Wheat mitochondrion 65.16 63.47
Os01t0976700-01 Rice mitochondrion 63.03 63.03
HORVU3Hr1G117670.6 Barley mitochondrion 65.69 62.53
KRH19775 Soybean cytosol 60.9 61.73
KRH32367 Soybean cytosol 60.9 61.73
Solyc02g083420.2.1 Tomato mitochondrion 63.83 61.54
Solyc03g033340.2.1 Tomato mitochondrion 63.56 60.2
TraesCS7A01G386400.1 Wheat cytosol 21.54 57.86
Solyc01g107300.2.1 Tomato cytosol 31.12 51.09
Solyc02g092750.2.1 Tomato cytosol 48.4 49.73
Solyc10g049630.1.1 Tomato mitochondrion, nucleus 49.47 48.95
Solyc06g065920.2.1 Tomato nucleus 48.4 48.66
HORVU2Hr1G009490.1 Barley mitochondrion 19.68 46.84
Solyc01g107310.2.1 Tomato mitochondrion 21.81 44.32
Solyc10g078810.1.1 Tomato cytosol 43.88 37.67
Solyc10g078820.1.1 Tomato mitochondrion 45.21 36.96
Solyc01g066870.2.1 Tomato cytosol, nucleus, peroxisome 22.61 26.81
Solyc10g086490.1.1 Tomato cytosol 30.59 19.3
Solyc09g010780.2.1 Tomato cytosol 30.32 18.3
Solyc12g099600.1.1 Tomato plasma membrane 25.8 16.87
Solyc06g076100.2.1 Tomato nucleus 31.12 16.53
Solyc08g007000.2.1 Tomato nucleus 31.12 14.98
Solyc08g077150.2.1 Tomato nucleus 30.05 14.2
Solyc10g078800.1.1 Tomato mitochondrion 41.49 11.89
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:18.4.24.2.4Gene3D:3.60.40.10GO:GO:0003674GO:GO:0003824
GO:GO:0004721GO:GO:0004722GO:GO:0005488GO:GO:0006464GO:GO:0006470GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016787GO:GO:0019538GO:GO:0043169GO:GO:0046872
InterPro:IPR001932InterPro:IPR036457UniProt:K4D3M7PFAM:PF00481InterPro:PP2CInterPro:PP2C_BS
InterPro:PPM-type_dom_sfInterPro:PPM-type_phosphatase_domScanProsite:PS01032PFscan:PS51746PANTHER:PTHR13832PANTHER:PTHR13832:SF367
SMART:SM00332SUPFAM:SSF81606EnsemblPlantsGene:Solyc10g084410.1EnsemblPlants:Solyc10g084410.1.1UniParc:UPI000276A26ESEG:seg
Description
No Description!
Coordinates
chr10:-:63961119..63963093
Molecular Weight (calculated)
41909.2 Da
IEP (calculated)
9.918
GRAVY (calculated)
-0.346
Length
376 amino acids
Sequence
(BLAST)
001: MVMLCWRRSG KRNCSHRGGD PNGRFKGLMW YKDLGVHANG EFSMAVIQAN NLMEDQSQLE SGPLSSMKLG PQGTFVGVYD GHGGPETSRF INNSIFSNLK
101: KFASEHQELS ADAIRKSFLK TEEEFLSLVK RQWQEKPQIA TVGSCCLAGV ICSGLLYTAN VGDSRAVLGR VDKSAKSVAA IQLSTEHNAS IESVRDELRS
201: LHPEDSQIVV LKHNVWRVKG IIQVSRSIGD AYLKKSEFNQ APLLARFRLP EPFSEPILSA EPSISVHKLS SKDQFVIFAS DGLWDHLSNQ EAVDIVHSHP
301: RNGIARELIK AALHIAAKKR EMRYSDLKKI DRGVRRHFHD DITVVVVFID PYSMNRSSSR RSILSIRGGT PSSPKM
Best Arabidopsis Sequence Match ( AT3G12620.1 )
(BLAST)
001: MVSSATILRM VAPCWRRPSV KGDHSTRDAN GRCDGLLWYK DSGNHVAGEF SMSVIQANNL LEDHSKLESG PVSMFDSGPQ ATFVGVYDGH GGPEAARFVN
101: KHLFDNIRKF TSENHGMSAN VITKAFLATE EDFLSLVRRQ WQIKPQIASV GACCLVGIIC SGLLYIANAG DSRVVLGRLE KAFKIVKAVQ LSSEHNASLE
201: SVREELRSLH PNDPQIVVLK HKVWRVKGII QVSRSIGDAY LKKAEFNREP LLAKFRVPEV FHKPILRAEP AITVHKIHPE DQFLIFASDG LWEHLSNQEA
301: VDIVNTCPRN GIARKLIKTA LREAAKKREM RYSDLKKIDR GVRRHFHDDI TVIVVFLDSH LVSRSTSRRP LLSISGGGDL AGPST
Arabidopsis Description
PP2C38Probable protein phosphatase 2C 38 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHJ9]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.