Factsheet for Zm00001d034777_P005

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d004978_P001
Zm00001d006398_P001
Zm00001d008293_P001
Zm00001d021515_P001
Zm00001d027827_P001
Zm00001d032616_P001
Zm00001d032991_P001
Zm00001d034768_P005
Zm00001d035095_P001
Zm00001d035598_P001
Zm00001d040343_P003
Zm00001d044917_P001
Zm00001d048131_P001
Zm00001d049665_P001
Zm00001d053306_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G23420.1	Zm00001d035095_P001	AT1G12310.1	21798944
AT2G23420.1	Zm00001d049665_P001	AT1G12310.1	21798944
AT2G23420.1	Zm00001d008293_P001	AT1G14640.1	21798944
AT2G23420.1	Zm00001d040343_P003	AT1G14640.1	21798944
AT2G23420.1	Zm00001d044917_P001	AT1G49590.1	21798944
AT2G23420.1	Zm00001d004978_P001	AT1G50450.1	21798944
AT2G23420.1	Zm00001d027827_P001	AT1G55270.1	21798944
AT2G23420.1	Zm00001d032991_P001	AT1G55270.1	21798944
AT2G23420.1	Zm00001d006398_P001	AT3G16250.1	21798944
AT2G23420.1	Zm00001d021515_P001	AT3G16250.1	21798944
AT2G23420.1	Zm00001d034768_P005	AT3G26420.1	21798944
AT2G23420.1	Zm00001d035598_P001	AT3G55260.1	21798944
AT2G23420.1	Zm00001d032616_P001	AT3G62250.1	21798944
AT2G23420.1	Zm00001d053306_P001	AT4G32750.1	21798944
AT2G23420.1	Zm00001d048131_P001	AT4G33920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU90665	Sorghum	peroxisome	94.79	93.29
Os03t0837300-02	Rice	plasma membrane	89.23	88.75
TraesCS5B01G517900.3	Wheat	peroxisome	87.25	84.23
TraesCS4A01G354500.1	Wheat	peroxisome	87.25	84.23
TraesCS5D01G517600.1	Wheat	peroxisome	86.89	83.88
GSMUA_Achr11P...	Banana	cytosol	77.74	83.59
KRH04597	Soybean	cytosol	61.94	81.37
PGSC0003DMT400010254	Potato	cytosol	80.43	80.29
Solyc02g093290.2.1	Tomato	cytosol, extracellular, nucleus	80.25	80.11
VIT_07s0031g00460.t01	Wine grape	cytosol	80.43	79.86
CDY63965	Canola	cytosol	74.33	79.62
KRH57934	Soybean	cytosol, nucleus	78.64	78.64
CDY66512	Canola	cytosol	78.46	78.6
Zm00001d003674_P001	Maize	extracellular	38.06	78.52
CDY46076	Canola	cytosol	78.28	78.42
Bra039198.1-P	Field mustard	cytosol	78.28	78.42
Bra017808.1-P	Field mustard	cytosol	73.97	78.33
AT4G36940.1	Thale cress	cytosol	78.46	78.18
AT2G23420.1	Thale cress	cytosol	78.1	78.1
CDY29537	Canola	cytosol	78.46	77.76
Solyc03g044430.2.1	Tomato	cytosol	77.02	75.8
KRH77015	Soybean	cytosol	74.51	74.37
Zm00001d003675_P001	Maize	plastid	28.55	71.3
Zm00001d025412_P001	Maize	plastid	78.64	68.01
KRH63322	Soybean	extracellular	9.69	65.06
KRH28456	Soybean	extracellular	19.93	58.73

Protein Annotations

KEGG:00760+6.3.4.21	EntrezGene:100274271	Gene3D:3.20.140.10	Gene3D:3.20.20.70	MapMan:7.9.2.2	InterPro:Aldolase_TIM
EMBL:BT067766	EMBL:BT086463	UniProt:C0PHJ7	GO:GO:0003674	GO:GO:0003824	GO:GO:0004514
GO:GO:0004516	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009435
GO:GO:0009987	GO:GO:0016740	GO:GO:0016757	GO:GO:0019358	InterPro:IPR013785	InterPro:Nic_PRibTrfase-Fam
InterPro:Nic_PRibTrfase_pncB	InterPro:Nicotinate_pribotase_like_C	ProteinID:ONM11371.1	PFAM:PF04095	PIRSF:PIRSF000484	PANTHER:PTHR11098
PANTHER:PTHR11098:SF17	SUPFAM:SSF51690	SUPFAM:SSF54675	TIGRFAMs:TIGR01513	UniParc:UPI000195CD9E	EnsemblPlantsGene:Zm00001d034777
EnsemblPlants:Zm00001d034777_P005	EnsemblPlants:Zm00001d034777_T005	:	:	:	:

Description

Nicotinate phosphoribosyltransferase 2

Coordinates

chr1:+:302038465..302052740

Molecular Weight (calculated)

62158.5 Da

IEP (calculated)

6.395

GRAVY (calculated)

-0.098

Length

557 amino acids

Sequence
(BLAST)

001: MAAANGDACR SVGGVPRPTN PMVTPLLTDL YQFTMAYAYW KAGKHLDRAV FDLYFRKNPF GGEFTIFGGL EECIRFIANF KFTEEEIKFL RSVMPACEDD
101: FFEYLRSIDC SDVEVYAIPE GYAVFPKVPL MRIEGPVAVV QLLETPFLSL VNYASLVTTN AARHRLVAGK SKNLLEFGLR RAQGPDGGIS ASRYCYMGGF
201: DATSNVAAGR LFGIPIRGTH SHAFVSSFMG LDEITDKTLT SSDGSNTCED FISLVQNWLI RIQDSSSLHG TFGETSQSEL AAFTSYALAF PNSFLALVDT
301: YDVMRSGVPN FCAVALALND MGYKAVGIRL DSGDLAYLSV EARKFFHAVE KEFVVVGFGK TSITASNDLN EETIDALNKQ GHEVDAFGIG TYLVTCYAQA
401: ALGCVFKLVE INKQPRIKLS EDVMKVSIPC KKKCYRLYGK EGYPLVDIMT GEDEPGPKIG ERLLCRHPFN ESKRAYVVPQ HVEELLKCYW PGNSSNSREE
501: LPSIHEIRTR CIHHLDRMRP DHMRRLNPTP YKVSVSAKLY DFIHFLWLNE APVGELQ

Best Arabidopsis Sequence Match ( AT2G23420.1 )
(BLAST)

001: MEPKENGSEL GQKIIDGPTN PMVTPLLNDL YQFTMAYAYW KAGKHNERSV FDLYFRKNPF GGEYTVFAGL EECVKFLANF KLTDEEIDFV QECLPGSEEA
101: FCDYLRGLDC SDVEVYAIPE GSVVFPKVPL MRVEGPVGVV QLLETPFLNL VNFASLVATN AARHRFVAGK SKSLLEFGAR RAQGPDGAIS ASKYCYLGGF
201: DATSNVAAGK LFGIPLRGTH SHAYVSSFMS TDEIVDKVLR SADGKTTCED FVSHVQTWLK KIQYSPSLSG IFSETNQSEL AAFTSYALAF PKTFLALVDT
301: YDVMKSGIPN FCAVALALND FGYKALGIRL DSGDLAYLSR EARNFFCTVE RELKVPGFGK MVVTASNDLN EETIDALNKQ GHEVDAFGIG TYLVTCYSQA
401: ALGCVFKLVE INNQPRIKLS EDVTKVSIPC KKRSYRLYGK EGYPLVDIMT GENEPPPKVG ERLLCRHPFN ESKRAYVVPQ RVEELLKCYW RGSADEAREV
501: LPPLKEIRDR CIKQLENMRP DHMRRLNPTP YKVSVSAKLY DFIHFLWLNE APVGELQ

Arabidopsis Description

NAPRT2Nicotinate phosphoribosyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84WV8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.