Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra007702.1-P | |
| Bra027506.1-P | |
| Bra039198.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G15450.1 | Bra039198.1-P | AT2G23420.1 | 21798944 |
| AT3G15450.1 | Bra007702.1-P | AT3G62800.1 | 21798944 |
| AT3G15450.1 | Bra027506.1-P | AT5G43830.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07847 | Canola | cytosol | 81.0 | 95.29 |
| CDY61102 | Canola | cytosol | 77.0 | 92.77 |
| Bra021110.1-P | Field mustard | cytosol | 68.0 | 26.88 |
| AT3G15450.1 | Thale cress | cytosol | 67.0 | 26.48 |
| Bra027243.1-P | Field mustard | cytosol | 67.0 | 26.48 |
| Bra019002.1-P | Field mustard | cytosol | 63.0 | 24.9 |
| Bra026348.1-P | Field mustard | cytosol | 52.0 | 20.8 |
| Bra010404.1-P | Field mustard | cytosol | 51.0 | 20.4 |
| VIT_00s0586g00030.t01 | Wine grape | cytosol | 51.0 | 19.92 |
| KRH10823 | Soybean | cytosol | 50.0 | 19.92 |
| KRH21498 | Soybean | cytosol | 49.0 | 19.52 |
| Os04t0679400-01 | Rice | cytosol | 50.0 | 19.38 |
| VIT_00s0561g00020.t01 | Wine grape | cytosol | 51.0 | 19.17 |
| KRH10843 | Soybean | nucleus | 48.0 | 19.12 |
| PGSC0003DMT400057793 | Potato | cytosol | 48.0 | 18.82 |
| Solyc02g078500.2.1 | Tomato | unclear | 48.0 | 18.82 |
| PGSC0003DMT400033379 | Potato | cytosol | 47.0 | 18.58 |
| Solyc03g006490.2.1 | Tomato | cytosol | 47.0 | 18.58 |
| EES13111 | Sorghum | cytosol, plastid | 48.0 | 18.25 |
| TraesCSU01G021600.1 | Wheat | cytosol | 48.0 | 18.18 |
| TraesCS2D01G600100.1 | Wheat | cytosol | 48.0 | 18.18 |
| TraesCS2A01G586500.1 | Wheat | cytosol | 48.0 | 18.18 |
| Zm00001d026632_P001 | Maize | extracellular | 48.0 | 18.11 |
| GSMUA_Achr10P... | Banana | cytosol | 47.0 | 17.67 |
| KRH20474 | Soybean | nucleus | 44.0 | 17.12 |
| GSMUA_Achr3P14300_001 | Banana | cytosol | 44.0 | 16.6 |
| Bra023707.1-P | Field mustard | cytosol | 26.0 | 15.48 |
| GSMUA_AchrUn_... | Banana | cytosol | 35.0 | 14.46 |
| HORVU2Hr1G118570.2 | Barley | cytosol | 39.0 | 14.39 |
| Bra027506.1-P | Field mustard | cytosol | 36.0 | 14.34 |
| Bra001889.1-P | Field mustard | cytosol | 34.0 | 13.65 |
| KRH50016 | Soybean | cytosol, nucleus, plastid | 42.0 | 13.38 |
| Bra002216.1-P | Field mustard | cytosol | 27.0 | 11.44 |
| KRH33539 | Soybean | cytosol | 10.0 | 6.21 |
| HORVU2Hr1G118550.2 | Barley | cytosol | 13.0 | 5.31 |
| KRG89645 | Soybean | cytosol | 10.0 | 5.15 |
| KRH63496 | Soybean | cytosol | 8.0 | 4.17 |
Protein Annotations
Description
AT3G15450 (E=1e-031) | unknown protein
Coordinates
chrA09:+:3661323..3661710
Molecular Weight (calculated)
11335.6 Da
IEP (calculated)
4.434
GRAVY (calculated)
-0.185
Length
100 amino acids
Sequence
(BLAST)
(BLAST)
1: MEESLYWRIL GDGSVVMSDD GQIIKQMMCQ IICSFPYWEY VHSEIGLKSF EHPEDNMKAM PMIDSEGVIC GANFQVDACT KINAIPRRGT EANWALANTR
001: MLAIFQKAFA HPPEELNSPA SHFSGKTPKL PGETLSDFLS HHQNNAFSMN FGDSAVLAYA RQETSLRQRL FCGLDGIYCM FLGRLNNLCT LNRQYGLSGK
101: NSNEAMFVIE AYRTLRDRGP YPADQVLRGL EGSFAFVVYD TQTSSVFSAL SSDGGESLYW GISGDGSVVM SDDIQIIKQG CAKSFAPFPN GCMFHSETGL
201: KSFDHPTNMM KAMPRIDSEG VLCGASFKVD ACSKINSIPR RGSEANWALA NSR
101: NSNEAMFVIE AYRTLRDRGP YPADQVLRGL EGSFAFVVYD TQTSSVFSAL SSDGGESLYW GISGDGSVVM SDDIQIIKQG CAKSFAPFPN GCMFHSETGL
201: KSFDHPTNMM KAMPRIDSEG VLCGASFKVD ACSKINSIPR RGSEANWALA NSR
Arabidopsis Description
Aluminum induced protein with YGL and LRDR motifs [Source:UniProtKB/TrEMBL;Acc:Q9LE80]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.