Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 4
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH48656 | Soybean | nucleus | 87.43 | 87.43 |
| KRH41860 | Soybean | nucleus | 70.16 | 72.04 |
| VIT_17s0000g02120.t01 | Wine grape | nucleus | 63.87 | 65.24 |
| Solyc03g118630.2.1 | Tomato | nucleus | 61.78 | 58.71 |
| PGSC0003DMT400014486 | Potato | nucleus | 62.3 | 58.33 |
| Bra001691.1-P | Field mustard | nucleus | 53.4 | 49.51 |
| CDY51925 | Canola | nucleus | 53.4 | 49.51 |
| CDX75951 | Canola | nucleus | 52.36 | 48.78 |
| AT3G17950.1 | Thale cress | nucleus, plastid | 51.83 | 46.92 |
| CDX95565 | Canola | nucleus, plastid | 51.31 | 46.67 |
| Bra021286.1-P | Field mustard | nucleus, plastid | 51.31 | 46.23 |
| TraesCS6D01G276000.1 | Wheat | nucleus | 36.13 | 38.76 |
| TraesCS6A01G295400.1 | Wheat | nucleus | 36.13 | 38.76 |
| TraesCS7D01G207500.1 | Wheat | nucleus | 39.79 | 38.58 |
| HORVU6Hr1G073560.1 | Barley | nucleus | 35.6 | 38.2 |
| TraesCS7B01G111600.1 | Wheat | nucleus | 39.79 | 38.19 |
| Zm00001d037340_P001 | Maize | nucleus | 39.79 | 38.19 |
| TraesCS6B01G325500.1 | Wheat | nucleus | 35.08 | 38.07 |
| Os02t0733400-00 | Rice | nucleus | 36.65 | 36.84 |
| EER88180 | Sorghum | nucleus | 40.84 | 36.11 |
| GSMUA_Achr9P27220_001 | Banana | plastid | 47.64 | 35.55 |
| EES05571 | Sorghum | nucleus | 34.55 | 35.29 |
| Zm00001d051793_P001 | Maize | nucleus | 34.03 | 34.95 |
| Os06t0256800-01 | Rice | mitochondrion | 34.55 | 30.99 |
| TraesCS7A01G204400.1 | Wheat | nucleus | 40.31 | 22.0 |
Protein Annotations
| EMBL:ACUP02005908 | EnsemblPlants:KRH39052 | EnsemblPlantsGene:GLYMA_09G174700 | EntrezGene:100778596 | PANTHER:PTHR33544 | PANTHER:PTHR33544:SF5 |
| ProteinID:KRH39052 | ProteinID:KRH39052.1 | SEG:seg | UniParc:UPI0002338D02 | UniProt:I1L447 | MapMan:35.1 |
Description
hypothetical protein
Coordinates
chr9:-:39915035..39915798
Molecular Weight (calculated)
20354.8 Da
IEP (calculated)
7.446
GRAVY (calculated)
-0.416
Length
191 amino acids
Sequence
(BLAST)
(BLAST)
001: MLDPASELVP PPSSPTISSI SSSDLDTEST GSFFHDRSTT LGTLMGVNFP TIAFRVPSQH RNPNSAAEDT GGARRAAAAV KKKKKATSIA TVAERRRRWW
101: QLCRDGDARP ASLGEFLEVE RRFGDGAFYG TAAELEGVVA GHQQRNGSRV LFADGRVLPP PEDVDDRAPP TESLCNRFPV SLAGICSGGA A
101: QLCRDGDARP ASLGEFLEVE RRFGDGAFYG TAAELEGVVA GHQQRNGSRV LFADGRVLPP PEDVDDRAPP TESLCNRFPV SLAGICSGGA A
001: MQDPHVPSSP TISSVSSSDL DTESTGSFFH DRSITLGTLM GFSFTATMPM PFRASSRRHV SPSVAISRAS SSNARRNHQR KRPPSNSAEP EPHRRRKWWR
101: FCRDDDDDAA GNGIHRGTGD SKRSSLGEYL EVERRFGDEA VYNSAEAELE DAVVARYQDQ QPVMGERALF ADGRVLPPAS AEVVTGEGTP VATSLCRFPV
201: SLTGICSGGG G
101: FCRDDDDDAA GNGIHRGTGD SKRSSLGEYL EVERRFGDEA VYNSAEAELE DAVVARYQDQ QPVMGERALF ADGRVLPPAS AEVVTGEGTP VATSLCRFPV
201: SLTGICSGGG G
Arabidopsis Description
Y-3Uncharacterized protein At3g17950 [Source:UniProtKB/Swiss-Prot;Acc:Q6DR24]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.