Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51925 | Canola | nucleus | 77.25 | 79.13 |
| Bra001691.1-P | Field mustard | nucleus | 77.25 | 79.13 |
| CDX95565 | Canola | nucleus, plastid | 78.2 | 78.57 |
| CDX75951 | Canola | nucleus | 75.83 | 78.05 |
| Bra021286.1-P | Field mustard | nucleus, plastid | 77.25 | 76.89 |
| KRH41860 | Soybean | nucleus | 47.87 | 54.3 |
| VIT_17s0000g02120.t01 | Wine grape | nucleus | 47.87 | 54.01 |
| KRH48656 | Soybean | nucleus | 47.87 | 52.88 |
| KRH39052 | Soybean | nucleus | 46.92 | 51.83 |
| PGSC0003DMT400014486 | Potato | nucleus | 49.29 | 50.98 |
| Solyc03g118630.2.1 | Tomato | nucleus | 47.87 | 50.25 |
| TraesCS7D01G207500.1 | Wheat | nucleus | 35.07 | 37.56 |
| Zm00001d037340_P001 | Maize | nucleus | 35.07 | 37.19 |
| TraesCS7B01G111600.1 | Wheat | nucleus | 35.07 | 37.19 |
| EER88180 | Sorghum | nucleus | 36.97 | 36.11 |
| TraesCS6B01G325500.1 | Wheat | nucleus | 29.86 | 35.8 |
| TraesCS6A01G295400.1 | Wheat | nucleus | 29.86 | 35.39 |
| TraesCS6D01G276000.1 | Wheat | nucleus | 29.86 | 35.39 |
| HORVU6Hr1G073560.1 | Barley | nucleus | 29.38 | 34.83 |
| GSMUA_Achr9P27220_001 | Banana | plastid | 40.76 | 33.59 |
| Os02t0733400-00 | Rice | nucleus | 29.86 | 33.16 |
| EES05571 | Sorghum | nucleus | 27.96 | 31.55 |
| Zm00001d051793_P001 | Maize | nucleus | 26.54 | 30.11 |
| Os06t0256800-01 | Rice | mitochondrion | 30.33 | 30.05 |
| TraesCS7A01G204400.1 | Wheat | nucleus | 35.07 | 21.14 |
Protein Annotations
| MapMan:35.1 | EntrezGene:820807 | UniProt:A0A178VFE9 | EMBL:AB019230 | ProteinID:AEE76028.1 | ProteinID:AEE76029.1 |
| ProteinID:ANM63426.1 | ArrayExpress:AT3G17950 | EnsemblPlantsGene:AT3G17950 | RefSeq:AT3G17950 | TAIR:AT3G17950 | RefSeq:AT3G17950-TAIR-G |
| EnsemblPlants:AT3G17950.1 | TAIR:AT3G17950.1 | EMBL:AY600573 | EMBL:AY600574 | EMBL:AY649291 | GO:GO:0005575 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | RefSeq:NP_001030719.1 | RefSeq:NP_001325514.1 | RefSeq:NP_188422.1 |
| ProteinID:OAP05177.1 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0004507 | PO:PO:0007095 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0020030 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR33544 |
| PANTHER:PTHR33544:SF5 | UniProt:Q6DR24 | UniParc:UPI0000163433 | SEG:seg | : | : |
Description
Y-3Uncharacterized protein At3g17950 [Source:UniProtKB/Swiss-Prot;Acc:Q6DR24]
Coordinates
chr3:+:6146015..6147354
Molecular Weight (calculated)
22902.4 Da
IEP (calculated)
6.791
GRAVY (calculated)
-0.635
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: MQDPHVPSSP TISSVSSSDL DTESTGSFFH DRSITLGTLM GFSFTATMPM PFRASSRRHV SPSVAISRAS SSNARRNHQR KRPPSNSAEP EPHRRRKWWR
101: FCRDDDDDAA GNGIHRGTGD SKRSSLGEYL EVERRFGDEA VYNSAEAELE DAVVARYQDQ QPVMGERALF ADGRVLPPAS AEVVTGEGTP VATSLCRFPV
201: SLTGICSGGG G
101: FCRDDDDDAA GNGIHRGTGD SKRSSLGEYL EVERRFGDEA VYNSAEAELE DAVVARYQDQ QPVMGERALF ADGRVLPPAS AEVVTGEGTP VATSLCRFPV
201: SLTGICSGGG G
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.