Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY32487 | Canola | cytosol | 98.56 | 56.49 |
| CDY37453 | Canola | cytosol | 93.88 | 53.81 |
| Bra032577.1-P | Field mustard | cytosol | 87.77 | 53.63 |
| AT1G02970.1 | Thale cress | cytosol, mitochondrion | 75.9 | 42.2 |
| VIT_07s0104g01740.t01 | Wine grape | cytosol | 44.96 | 27.65 |
| KRH68152 | Soybean | mitochondrion | 44.24 | 24.36 |
| KRH17892 | Soybean | cytosol | 37.05 | 23.46 |
| CDX86692 | Canola | nucleus | 75.54 | 22.93 |
| Solyc09g074830.2.1 | Tomato | plastid | 41.01 | 22.35 |
| PGSC0003DMT400029618 | Potato | cytosol | 27.34 | 20.99 |
| Os02t0135300-00 | Rice | cytosol | 38.85 | 20.77 |
| GSMUA_Achr1P12130_001 | Banana | mitochondrion | 18.35 | 20.48 |
| KXG29416 | Sorghum | mitochondrion | 37.77 | 19.52 |
| Zm00001d053998_P001 | Maize | mitochondrion | 37.41 | 19.33 |
| HORVU6Hr1G018060.2 | Barley | cytosol | 33.09 | 19.21 |
| TraesCS6A01G099900.1 | Wheat | mitochondrion | 35.61 | 19.11 |
| TraesCS6B01G128100.1 | Wheat | mitochondrion | 34.53 | 18.68 |
| TraesCS6D01G082400.1 | Wheat | mitochondrion | 34.53 | 18.64 |
| GSMUA_Achr1P12120_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 16.19 | 15.85 |
Protein Annotations
| EnsemblPlants:CDY01309 | EnsemblPlantsGene:GSBRNA2T00112254001 | Gene3D:3.30.200.20 | GO:A0A078EKP3 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005524 | InterPro:Kinase-like_dom_sf | InterPro:Protein_kinase_ATP_BS | PANTHER:PTHR11042 | PANTHER:PTHR11042:SF128 |
| ProteinID:CDY01309 | ProteinID:CDY01309.1 | ScanProsite:PS00107 | SUPFAM:SSF56112 | UniParc:UPI0004EF04B2 | MapMan:35.1 |
Description
BnaA07g10820D
Coordinates
chrLK031926:+:100731..102253
Molecular Weight (calculated)
31241.8 Da
IEP (calculated)
9.007
GRAVY (calculated)
-0.747
Length
278 amino acids
Sequence
(BLAST)
(BLAST)
001: MFEKKGRTLL AKRKKSLGAI DTRRTKKSRE MEGHSLLRFG QLTKLSFDNR PPSNAAESSS ELRNELGSVD GDGDCGEKGF ILSQDFFCTP DYITPDNQNL
101: MSALDSSKDQ SPCPRSPVKL NTVKSKRCRQ DSFASKTSNY TWSSKHRVDE QEHGDIDTDE VMVDKIQANQ TERTGYVTQT AVALRSRVMP PPCLKNPYVM
201: NDSETATDPF GYQRSKCASF LPASMSGDGL SRYLTDFHEI QQIGAGNFSR VFKVLKRIDG CLYAVKYSTR KLILDSER
101: MSALDSSKDQ SPCPRSPVKL NTVKSKRCRQ DSFASKTSNY TWSSKHRVDE QEHGDIDTDE VMVDKIQANQ TERTGYVTQT AVALRSRVMP PPCLKNPYVM
201: NDSETATDPF GYQRSKCASF LPASMSGDGL SRYLTDFHEI QQIGAGNFSR VFKVLKRIDG CLYAVKYSTR KLILDSER
001: MFEKNGRTLL AKRKTQGTIK TRASKKIRKM EGTLERHSLL QFGQLSKISF ENRPSSNVAS SAFQGLLDSD SSELRNQLGS ADSDANCGEK DFILSQDFFC
101: TPDYITPDNQ NLMSGLDISK DHSPCPRSPV KLNTVKSKRC RQESFTGNHS NSTWSSKHRV DEQENDDIDT DEVMGDKLQA NQTERTGYVS QAAVALRCRA
201: MPPPCLKNPY VLNQSETATD PFGHQRSKCA SFLPVSTSGD GLSRYLTDFH EIRQIGAGHF SRVFKVLKRM DGCLYAVKHS TRKLYLDSER RKAMMEVQAL
301: AALGFHENIV GYYSSWFENE QLYIQLELCD HSLSALPKKS SLKVSEREIL VIMHQIAKAL HFVHEKGIAH LDVKPDNIYI KNGVCKLGDF GCATRLDKSL
401: PVEEGDARYM PQEILNEDYE HLDKVDIFSL GVTVYELIKG SPLTESRNQS LNIKEGKLPL LPGHSLQLQQ LLKTMMDRDP KRRPSARELL DHPMFDRIRG
101: TPDYITPDNQ NLMSGLDISK DHSPCPRSPV KLNTVKSKRC RQESFTGNHS NSTWSSKHRV DEQENDDIDT DEVMGDKLQA NQTERTGYVS QAAVALRCRA
201: MPPPCLKNPY VLNQSETATD PFGHQRSKCA SFLPVSTSGD GLSRYLTDFH EIRQIGAGHF SRVFKVLKRM DGCLYAVKHS TRKLYLDSER RKAMMEVQAL
301: AALGFHENIV GYYSSWFENE QLYIQLELCD HSLSALPKKS SLKVSEREIL VIMHQIAKAL HFVHEKGIAH LDVKPDNIYI KNGVCKLGDF GCATRLDKSL
401: PVEEGDARYM PQEILNEDYE HLDKVDIFSL GVTVYELIKG SPLTESRNQS LNIKEGKLPL LPGHSLQLQQ LLKTMMDRDP KRRPSARELL DHPMFDRIRG
Arabidopsis Description
WEE1Wee1-like protein kinase [Source:UniProtKB/Swiss-Prot;Acc:Q8L4H0]
SUBAcon: [cytosol,mitochondrion]
SUBAcon: [cytosol,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.