CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 1
endoplasmic reticulum 4
extracellular 3
vacuole 3
plasma membrane 5
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra026808.1-P	Field mustard	plasma membrane	99.55	99.55
CDY33743	Canola	plasma membrane	99.55	99.55
CDY41099	Canola	plasma membrane	95.54	95.54
CDY45283	Canola	plasma membrane	95.54	95.54
AT1G14730.1	Thale cress	plasma membrane	93.3	93.3
KRH58610	Soybean	plasma membrane	54.02	57.08
PGSC0003DMT400058674	Potato	plasma membrane	35.71	52.63
VIT_01s0011g06240.t01	Wine grape	plasma membrane	50.89	52.53
KRH49716	Soybean	plasma membrane	49.55	52.11
KRH42515	Soybean	golgi, plasma membrane	50.45	51.13
KRG89270	Soybean	plasma membrane	41.96	50.27
Solyc01g005150.2.1	Tomato	endoplasmic reticulum, plasma membrane	48.66	48.66
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid	43.75	44.55
TraesCS4A01G264900.1	Wheat	plasma membrane	43.3	42.54
Zm00001d033778_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	42.86	42.48
EER93563	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	42.86	42.48
Os03t0717200-00	Rice	golgi, plasma membrane, vacuole	42.86	42.11
TraesCS4D01G050300.1	Wheat	plasma membrane	42.41	41.67
TraesCS4B01G049900.1	Wheat	plasma membrane	41.96	41.23
CDX74514	Canola	extracellular	34.38	33.48
CDY01648	Canola	extracellular	33.93	33.04
HORVU4Hr1G008200.8	Barley	cytosol, mitochondrion, plasma membrane	33.48	32.19
CDY57373	Canola	plasma membrane	33.04	31.49
CDY50196	Canola	plasma membrane	33.04	31.49
CDX92719	Canola	plasma membrane	33.04	31.49
CDY27081	Canola	plasma membrane	29.91	28.76
CDX91626	Canola	plasma membrane	29.46	28.33
CDY55954	Canola	extracellular	26.79	25.75
CDY36092	Canola	extracellular	26.79	25.75
CDX94439	Canola	extracellular	14.73	25.19
CDY20529	Canola	plasma membrane	26.34	24.69

Protein Annotations

EnsemblPlants:CDX81667	EnsemblPlantsGene:GSBRNA2T00136585001	Gene3D:1.20.120.1770	GO:A0A078CXZ7	InterPro:Cyt_b561/ferric_Rdtase_TM	InterPro:IPR006593
PANTHER:PTHR10106	PANTHER:PTHR10106:SF15	PFAM:PF03188	PFscan:PS50939	ProteinID:CDX81667	ProteinID:CDX81667.1
SEG:seg	SMART:SM00665	TMHMM:TMhelix	UniParc:UPI0004EAD7BD	MapMan:35.1	:

Description

BnaC08g39340D

Coordinates

chrLK031826:+:275173..276502

Molecular Weight (calculated)

24710.9 Da

IEP (calculated)

10.183

GRAVY (calculated)

0.604

Length

224 amino acids

Sequence
(BLAST)

001: MDVSADRTPF KRHSSLSTLV AHFFGILAVV LMLIWLLHYR EGIEYGSDNP LKILNVHPFL MYCGFLFLVG QAMMTYKTAY ASHQVQKMVH GGLHLIGLVL
101: GIVGISAAFR FHDKLNLKDM VSLHSWIGLT TFILLGLQWL LGAFTFLAPQ SSSGARARMM PWHVLGGRAL FYMGIVAALT GLMQRATMLG QSTNAESRLI
201: NFTGLAILLF GVSVDFSVAL GRYG

Best Arabidopsis Sequence Match ( AT1G14730.1 )
(BLAST)

001: MNLSGDRTTL KRHSSLSTLV AHFFGILAVV LMLIWLLHYR EGIEYGSDNP LKVLNVHPFL MYCGFLFLVG QAMMTYKTAY ASHQVQKMVH GGLHLIGLVL
101: GIVGICAAFR FHDKVNLKDM VSLHSWIGLT TFILLGVQWL FGAFTFLAPQ SSSGTRTRMM PWHVLGGRAL LYMGIVAALT GLMQRATMLG QSTNAESRLI
201: NFLGLAILLF GVSVDFSVAL GRYN

Arabidopsis Description

CYB561CProbable transmembrane ascorbate ferrireductase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q67ZF6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.