Factsheet for VIT_01s0011g06240.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 1
extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	mitochondrion
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH49716	Soybean	plasma membrane	55.3	56.34
KRG89270	Soybean	plasma membrane	48.39	56.15
KRH58610	Soybean	plasma membrane	51.15	52.36
PGSC0003DMT400058674	Potato	plasma membrane	36.41	51.97
Bra026808.1-P	Field mustard	plasma membrane	53.0	51.34
CDY33743	Canola	plasma membrane	53.0	51.34
CDY41099	Canola	plasma membrane	53.0	51.34
CDX81667	Canola	plasma membrane	52.53	50.89
CDY45283	Canola	plasma membrane	52.53	50.89
AT1G14730.1	Thale cress	plasma membrane	52.07	50.45
Bra026193.1-P	Field mustard	plasma membrane	51.61	50.0
Solyc01g005150.2.1	Tomato	endoplasmic reticulum, plasma membrane	50.69	49.11
KRH42515	Soybean	golgi, plasma membrane	46.08	45.25
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid	41.94	41.36
VIT_01s0011g06230.t01	Wine grape	plasma membrane	41.94	40.99
TraesCS4B01G049900.1	Wheat	plasma membrane	41.47	39.47
TraesCS4D01G050300.1	Wheat	plasma membrane	41.47	39.47
Zm00001d033778_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	41.01	39.38
TraesCS4A01G264900.1	Wheat	plasma membrane	41.01	39.04
EER93563	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	40.55	38.94
Os03t0717200-00	Rice	golgi, plasma membrane, vacuole	39.63	37.72
VIT_14s0083g00180.t01	Wine grape	plasma membrane	38.71	36.21
VIT_16s0050g00090.t01	Wine grape	plasma membrane	35.02	33.04
HORVU4Hr1G008200.8	Barley	cytosol, mitochondrion, plasma membrane	32.26	30.04
VIT_01s0011g06220.t01	Wine grape	plasma membrane	25.35	28.95
VIT_01s0011g02840.t01	Wine grape	plasma membrane	28.57	25.62

Protein Annotations

Gene3D:1.20.120.1770	EntrezGene:100244034	wikigene:100244034	MapMan:35.1	ProteinID:CBI26788	ProteinID:CBI26788.3
InterPro:Cyt_b561/ferric_Rdtase_TM	UniProt:D7T8G7	EMBL:FN595752	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0055114
InterPro:IPR006593	EntrezGene:LOC100244034	wikigene:LOC100244034	PFAM:PF03188	PFscan:PS50939	PANTHER:PTHR10106
PANTHER:PTHR10106:SF15	SMART:SM00665	TIGR:TC60594	TMHMM:TMhelix	UniParc:UPI00015C8D65	ArrayExpress:VIT_01s0011g06240
EnsemblPlantsGene:VIT_01s0011g06240	EnsemblPlants:VIT_01s0011g06240.t01	unigene:Vvi.5311	RefSeq:XP_002285137	RefSeq:XP_002285137.1	SEG:seg

Description

No Description!

Coordinates

chr1:-:6034327..6035646

Molecular Weight (calculated)

24541.8 Da

IEP (calculated)

9.880

GRAVY (calculated)

0.710

Length

217 amino acids

Sequence
(BLAST)

001: MFRRSTSGLT VLAHSFGILS LILLLFWLLH YRGGLNLESD ISERIFNVHP FMMFFGLIFL SGEGMMAYKT IAAEKPVQKF IHMLLHLIAI CMGIIGIHAV
101: LKFHNKENIE DFYSLHSWVG IATFSIFLLQ WLVGFVLFMF PKASPGTRAR ALPWHICGGR ALLYMAISSA LTGLMEKATL LGDKYHSNQA RTINFLGLSI
201: LLFGIFVDFS LVFARYV

Best Arabidopsis Sequence Match ( AT1G14730.1 )
(BLAST)

001: MNLSGDRTTL KRHSSLSTLV AHFFGILAVV LMLIWLLHYR EGIEYGSDNP LKVLNVHPFL MYCGFLFLVG QAMMTYKTAY ASHQVQKMVH GGLHLIGLVL
101: GIVGICAAFR FHDKVNLKDM VSLHSWIGLT TFILLGVQWL FGAFTFLAPQ SSSGTRTRMM PWHVLGGRAL LYMGIVAALT GLMQRATMLG QSTNAESRLI
201: NFLGLAILLF GVSVDFSVAL GRYN

Arabidopsis Description

CYB561CProbable transmembrane ascorbate ferrireductase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q67ZF6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.