Factsheet for VIT_01s0011g02840.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 8
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH70628	Soybean	plasma membrane	76.03	76.03
KRH75524	Soybean	extracellular, golgi, plasma membrane	74.38	75.95
Solyc05g009950.2.1	Tomato	plasma membrane	73.14	74.06
PGSC0003DMT400002104	Potato	plasma membrane	73.55	73.55
AT1G26100.1	Thale cress	plasma membrane	64.05	65.68
Bra011008.1-P	Field mustard	extracellular, golgi, plasma membrane	61.98	64.38
CDY55954	Canola	extracellular	61.98	64.38
CDY36092	Canola	extracellular	61.57	63.95
CDY20529	Canola	plasma membrane	58.68	59.41
GSMUA_Achr8P29770_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	47.52	46.37
VIT_14s0083g00180.t01	Wine grape	plasma membrane	40.5	42.24
VIT_16s0050g00090.t01	Wine grape	plasma membrane	33.06	34.78
VIT_01s0011g06230.t01	Wine grape	plasma membrane	30.99	33.78
VIT_01s0011g06220.t01	Wine grape	plasma membrane	22.73	28.95
VIT_01s0011g06240.t01	Wine grape	plasma membrane	25.62	28.57

Protein Annotations

Gene3D:1.20.120.1770	EntrezGene:100264480	wikigene:100264480	MapMan:35.1	ProteinID:CBI27079	ProteinID:CBI27079.3
InterPro:Cyt_b561/ferric_Rdtase_TM	UniProt:D7T9A8	EMBL:FN595752	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0055114
InterPro:IPR006593	EntrezGene:LOC100264480	wikigene:LOC100264480	PFAM:PF03188	PFscan:PS50939	PANTHER:PTHR10106
PANTHER:PTHR10106:SF20	SMART:SM00665	TIGR:TC52865	TMHMM:TMhelix	UniParc:UPI00015C7B70	ArrayExpress:VIT_01s0011g02840
EnsemblPlantsGene:VIT_01s0011g02840	EnsemblPlants:VIT_01s0011g02840.t01	unigene:Vvi.4498	RefSeq:XP_002281093	RefSeq:XP_002281093.1	SEG:seg

Description

No Description!

Coordinates

chr1:+:2525946..2527902

Molecular Weight (calculated)

26600.0 Da

IEP (calculated)

9.525

GRAVY (calculated)

0.695

Length

242 amino acids

Sequence
(BLAST)

001: MATASSASLP LPLLLFARVS ALFVALLVLF WALAFKSSFI SHHSSQEDIV YAVLHPLFMV IGFILISGEA ILVHRWLPGS RNLKKSVHLS MQGLALASGV
101: FGIWTNFHGQ DGIVANFWSL HSWMGLICML LFGAQWLIGF LSFWHRGEMR TTRVSVLPWH VFLGLYTYGL AVATAETGLL EKLTFLQTNR NVSKHCTESM
201: VVNGVGVGLA LLSGIVILAA VCPKYQTLPS KLMYSDTKCL SS

Best Arabidopsis Sequence Match ( AT1G26100.1 )
(BLAST)

001: MGSVDPSRLS LVLFARLSGL VVAVSVLYWA LFLPNLGLSY STLHPLLMVI GFILVSGEAI LIHRWLPGSR KTKKAVHLWL QGMALASAVF GIWTKFHYQR
101: GVFANFYSLH SWMGLLSVSL FAAQWVTGFM SFWHRGEVRT TRTTFLPWHV FLGLYTYGLA IATAETGLLE KLTFLQTKRN VPRRGSESMT VNGLGLGLAL
201: LGCIVITAAI LPKYQSHSRD EKLVYSSQDR PKCLSS

Arabidopsis Description

CYB561DProbable transmembrane ascorbate ferrireductase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C540]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.