Factsheet for VIT_16s0050g00090.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 8
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g025840.2.1	Tomato	plasma membrane	72.61	72.29
PGSC0003DMT400037195	Potato	plasma membrane	72.61	72.29
KRH35325	Soybean	mitochondrion, nucleus	70.43	70.13
Bra019153.1-P	Field mustard	plasma membrane	71.3	69.79
CDX92719	Canola	plasma membrane	71.3	69.79
CDY50196	Canola	plasma membrane	71.3	69.79
CDY57373	Canola	plasma membrane	71.3	69.79
KRG91503	Soybean	nucleus	70.0	69.7
Os04t0533500-02	Rice	plasma membrane	66.96	65.25
GSMUA_Achr4P26140_001	Banana	plasma membrane	66.09	64.68
EES05833	Sorghum	plasma membrane	65.22	63.29
TraesCS2D01G366100.1	Wheat	plasma membrane	65.22	63.03
TraesCS6A01G237300.1	Wheat	plasma membrane	63.91	62.82
KXG26783	Sorghum	plasma membrane	63.91	62.82
HORVU2Hr1G091720.2	Barley	plasma membrane	64.78	62.6
TraesCS2A01G369700.1	Wheat	plasma membrane	64.78	62.6
TraesCS6B01G265800.2	Wheat	plasma membrane	64.35	62.45
TraesCS6D01G219900.1	Wheat	plasma membrane	63.48	62.39
Bra022581.1-P	Field mustard	plasma membrane	63.04	62.23
TraesCS2B01G386700.1	Wheat	plasma membrane	64.35	62.18
GSMUA_Achr1P00250_001	Banana	plasma membrane	63.48	62.13
CDY27081	Canola	plasma membrane	62.61	61.8
CDX91626	Canola	plasma membrane	62.17	61.37
GSMUA_Achr1P06830_001	Banana	plasma membrane	61.3	60.78
Os10t0504200-01	Rice	plasma membrane	60.43	60.43
TraesCS1A01G174900.1	Wheat	plasma membrane	49.13	59.79
TraesCS1B01G189800.1	Wheat	plasma membrane	58.7	58.7
TraesCS1D01G164200.1	Wheat	plasma membrane	57.83	57.83
AT4G25570.2	Thale cress	plasma membrane	69.57	57.14
Os02t0642300-01	Rice	extracellular, golgi, mitochondrion	25.22	56.31
CDX94439	Canola	extracellular	31.3	54.96
Zm00001d032521_P004	Maize	plasma membrane	54.35	54.35
EER91407	Sorghum	plasma membrane	53.04	53.04
Zm00001d052746_P001	Maize	plasma membrane	52.17	51.95
Os08t0101700-01	Rice	golgi, plasma membrane, plastid	53.48	51.68
HORVU1Hr1G046270.2	Barley	plastid	59.13	50.75
HORVU7Hr1G078690.1	Barley	endoplasmic reticulum, plasma membrane, plastid	50.43	48.54
TraesCS7A01G328700.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	50.0	48.52
Zm00001d051272_P001	Maize	plastid	65.65	48.4
HORVU6Hr1G060720.1	Barley	vacuole	64.78	48.38
TraesCS7B01G229400.1	Wheat	golgi, plasma membrane, vacuole	49.57	48.1
TraesCS7D01G325600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	49.57	48.1
OQU75566	Sorghum	plasma membrane	52.17	42.25
VIT_14s0083g00180.t01	Wine grape	plasma membrane	42.61	42.24
VIT_01s0011g06230.t01	Wine grape	plasma membrane	39.13	40.54
VIT_01s0011g06240.t01	Wine grape	plasma membrane	33.04	35.02
Zm00001d002837_P001	Maize	plasma membrane	62.61	33.72
VIT_01s0011g02840.t01	Wine grape	plasma membrane	34.78	33.06
VIT_01s0011g06220.t01	Wine grape	plasma membrane	24.78	30.0

Protein Annotations

Gene3D:1.20.120.1770	EntrezGene:100255839	wikigene:100255839	MapMan:35.1	UniProt:A5C961	EMBL:AM486653
ProteinID:CAN73186	ProteinID:CAN73186.1	ProteinID:CBI22752	ProteinID:CBI22752.3	InterPro:Cyt_b561/ferric_Rdtase_TM	EMBL:FN595243
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507
GO:GO:0009536	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0019904	GO:GO:0055114
InterPro:IPR006593	EntrezGene:LOC100255839	wikigene:LOC100255839	PFAM:PF03188	PFscan:PS50939	PANTHER:PTHR10106
PANTHER:PTHR10106:SF22	SMART:SM00665	TIGR:TC61996	TMHMM:TMhelix	UniParc:UPI0001522B12	ArrayExpress:VIT_16s0050g00090
EnsemblPlantsGene:VIT_16s0050g00090	EnsemblPlants:VIT_16s0050g00090.t01	unigene:Vvi.3984	RefSeq:XP_002267852	RefSeq:XP_002267852.1	SEG:seg

Description

No Description!

Coordinates

chr16:-:16936427..16939248

Molecular Weight (calculated)

24867.3 Da

IEP (calculated)

8.393

GRAVY (calculated)

1.003

Length

230 amino acids

Sequence
(BLAST)

001: MAIGGKAVPL SFVAHALAVA GAVMVLVWCI YFLGGLAWEA TNKALIFNLH PVLMLIGLVI IGGQAIMSYK SLPLRKEVKK VIHLVLHAIA LILGIIGIYA
101: AFKNHNESGI ANLYSLHSWL GIVLISLYGI QWIYGFLVFF YPGGTLGLRS ASLPWHVLFG LLVYVLVVGN AELGFLEKLT FLESSGLAKY GAEALLVNFT
201: AIVTILYGVF VVMTALSQPP PEEDYGYSAI

Best Arabidopsis Sequence Match ( AT4G25570.2 )
(BLAST)

001: MENLRIDSSQ RPRLKINRTK EIRRVEKTTR RKKHSCRRER DMAVRINAMA VTFVAHALAV IAAIMVLVWS ISYRGGLAWE ATNKNLIFNL HPVLMLIGFI
101: ILGGEAIISY KSLPLEKPVK KLIHLILHAI ALALGIFGIC AAFKNHNESH IPNLYSLHSW IGIGVISLYG FQWVYSFIVF FFPGGSTNLK SGLLPWHAML
201: GLFVYILAVG NAALGFLEKL TFLENGGLDK YGSEAFLINF TAIITILFGA FVVLTASAES PSPSPSVSND DSVDFSYSAI

Arabidopsis Description

ACYB-2Cytochrome b561/ferric reductase transmembrane protein family [Source:UniProtKB/TrEMBL;Acc:A0A1P8B653]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.