Factsheet for TraesCS1B01G189800.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 5
golgi 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G164200.1	Wheat	plasma membrane	96.52	96.52
TraesCS1A01G174900.1	Wheat	plasma membrane	77.39	94.18
Zm00001d032521_P004	Maize	plasma membrane	83.48	83.48
HORVU1Hr1G046270.2	Barley	plastid	96.96	83.21
Os10t0504200-01	Rice	plasma membrane	81.74	81.74
EER91407	Sorghum	plasma membrane	81.3	81.3
GSMUA_Achr1P00250_001	Banana	plasma membrane	69.57	68.09
GSMUA_Achr4P26140_001	Banana	plasma membrane	69.13	67.66
TraesCS2B01G386700.1	Wheat	plasma membrane	66.96	64.71
TraesCS6B01G265800.2	Wheat	plasma membrane	64.78	62.87
VIT_16s0050g00090.t01	Wine grape	plasma membrane	58.7	58.7
KRG91503	Soybean	nucleus	57.39	57.14
KRH35325	Soybean	mitochondrion, nucleus	57.39	57.14
CDY57373	Canola	plasma membrane	57.83	56.6
CDY50196	Canola	plasma membrane	57.83	56.6
CDX92719	Canola	plasma membrane	57.83	56.6
Bra019153.1-P	Field mustard	plasma membrane	57.83	56.6
PGSC0003DMT400037195	Potato	plasma membrane	53.91	53.68
Solyc03g025840.2.1	Tomato	plasma membrane	53.91	53.68
Bra022581.1-P	Field mustard	plasma membrane	52.61	51.93
TraesCS7B01G229400.1	Wheat	golgi, plasma membrane, vacuole	53.48	51.9
CDY27081	Canola	plasma membrane	52.17	51.5
CDX91626	Canola	plasma membrane	52.17	51.5
AT4G25570.2	Thale cress	plasma membrane	57.83	47.5
CDX94439	Canola	extracellular	26.52	46.56
TraesCS7B01G199100.1	Wheat	plasma membrane	45.65	44.87
TraesCS4B01G049900.1	Wheat	plasma membrane	39.57	39.91

Protein Annotations

EnsemblPlants:TraesCS1B01G189800.1	EnsemblPlantsGene:TraesCS1B01G189800	Gene3D:1.20.120.1770	InterPro:Cyt_b561/ferric_Rdtase_TM	InterPro:IPR006593	PANTHER:PTHR10106
PANTHER:PTHR10106:SF18	PFAM:PF03188	PFscan:PS50939	SEG:seg	SMART:SM00665	TIGR:cd08766
TMHMM:TMhelix	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr1B:+:340463640..340465750

Molecular Weight (calculated)

24721.7 Da

IEP (calculated)

10.193

GRAVY (calculated)

0.782

Length

230 amino acids

Sequence
(BLAST)

001: MAVPAPAKAA RALAATAAAL VLLWCVHFRG GLALSSPTNK GLIFNVHPVL MLIGFIIIGS EAIMSYKTLP WSHDTNKTVH LILHAVALFL GSFGVYAAFK
101: FHNESGIANL YSLHSWVGLG TIILYGLQWV SGFLTFFFPG ASPTLRRAVL PWHVRAGLVV YVLALLAAEL GFLEKLTFLQ ATGLGKYSSE ALLVNFTALV
201: VLLLGASVVL YVTAPAQSEH RLGYSSVRKS

Best Arabidopsis Sequence Match ( AT5G38630.1 )
(BLAST)

001: MAVPVLGGFP IFMVVRVLGF IIAALVLTWT VHYRGGLALS SDNKDHIFNV HPVMMVIGLI LFNGEAMLAY KSVQGTKNLK KLVHLTLQLT AFILSLIGVW
101: AALKFHIDKG IENFYSLHSW LGLACLFLFA FQWAAGFVTY WYPGGSRNSR ASLMPWHVFL GISIYALALV TATTGILEKV TFLQVNQVIT RYSTEAMLVN
201: TMGVLILILG GFVILGVVTP VSGKDQVLTQ

Arabidopsis Description

CYB561BProbable transmembrane ascorbate ferrireductase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SWS1]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.