Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 7
- golgi 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
mitochondrion: 28499913 |
msms PMID:
21132161
doi
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID:
28499913
doi
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG91503 | Soybean | nucleus | 95.67 | 95.67 |
| VIT_16s0050g00090.t01 | Wine grape | plasma membrane | 70.13 | 70.43 |
| PGSC0003DMT400037195 | Potato | plasma membrane | 68.4 | 68.4 |
| Solyc03g025840.2.1 | Tomato | plasma membrane | 68.4 | 68.4 |
| Bra019153.1-P | Field mustard | plasma membrane | 67.53 | 66.38 |
| CDY57373 | Canola | plasma membrane | 67.53 | 66.38 |
| CDY50196 | Canola | plasma membrane | 67.53 | 66.38 |
| CDX92719 | Canola | plasma membrane | 67.53 | 66.38 |
| Os04t0533500-02 | Rice | plasma membrane | 65.37 | 63.98 |
| GSMUA_Achr4P26140_001 | Banana | plasma membrane | 64.94 | 63.83 |
| KXG26783 | Sorghum | plasma membrane | 64.5 | 63.68 |
| TraesCS2A01G369700.1 | Wheat | plasma membrane | 65.37 | 63.45 |
| TraesCS2B01G386700.1 | Wheat | plasma membrane | 65.37 | 63.45 |
| TraesCS2D01G366100.1 | Wheat | plasma membrane | 65.37 | 63.45 |
| CDX91626 | Canola | plasma membrane | 63.64 | 63.09 |
| HORVU2Hr1G091720.2 | Barley | plasma membrane | 64.94 | 63.03 |
| GSMUA_Achr1P00250_001 | Banana | plasma membrane | 63.64 | 62.55 |
| TraesCS6A01G237300.1 | Wheat | plasma membrane | 62.77 | 61.97 |
| Bra022581.1-P | Field mustard | plasma membrane | 62.34 | 61.8 |
| TraesCS6D01G219900.1 | Wheat | plasma membrane | 62.34 | 61.54 |
| CDY27081 | Canola | plasma membrane | 61.9 | 61.37 |
| Os02t0642300-01 | Rice | extracellular, golgi, mitochondrion | 27.27 | 61.16 |
| EES05833 | Sorghum | plasma membrane | 62.34 | 60.76 |
| TraesCS6B01G265800.2 | Wheat | plasma membrane | 61.9 | 60.34 |
| GSMUA_Achr1P06830_001 | Banana | plasma membrane | 59.31 | 59.05 |
| Os10t0504200-01 | Rice | plasma membrane | 57.58 | 57.83 |
| TraesCS1B01G189800.1 | Wheat | plasma membrane | 57.14 | 57.39 |
| TraesCS1A01G174900.1 | Wheat | plasma membrane | 46.75 | 57.14 |
| TraesCS1D01G164200.1 | Wheat | plasma membrane | 56.28 | 56.52 |
| AT4G25570.2 | Thale cress | plasma membrane | 67.53 | 55.71 |
| Zm00001d032521_P004 | Maize | plasma membrane | 55.41 | 55.65 |
| EER91407 | Sorghum | plasma membrane | 54.98 | 55.22 |
| Zm00001d052746_P001 | Maize | plasma membrane | 54.55 | 54.55 |
| HORVU7Hr1G078690.1 | Barley | endoplasmic reticulum, plasma membrane, plastid | 53.68 | 51.88 |
| Os08t0101700-01 | Rice | golgi, plasma membrane, plastid | 52.81 | 51.26 |
| TraesCS7A01G328700.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 51.52 | 50.21 |
| HORVU1Hr1G046270.2 | Barley | plastid | 58.01 | 50.0 |
| TraesCS7D01G325600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 51.08 | 49.79 |
| TraesCS7B01G229400.1 | Wheat | golgi, plasma membrane, vacuole | 51.08 | 49.79 |
| CDX94439 | Canola | extracellular | 27.27 | 48.09 |
| HORVU6Hr1G060720.1 | Barley | vacuole | 62.34 | 46.75 |
| Zm00001d051272_P001 | Maize | plastid | 62.77 | 46.47 |
| KRG93825 | Soybean | endoplasmic reticulum | 45.45 | 45.26 |
| KRG89271 | Soybean | plasma membrane | 41.99 | 44.09 |
| OQU75566 | Sorghum | plasma membrane | 53.68 | 43.66 |
| KRG89270 | Soybean | plasma membrane | 32.47 | 40.11 |
| KRH49716 | Soybean | plasma membrane | 36.36 | 39.44 |
| KRH58610 | Soybean | plasma membrane | 35.93 | 39.15 |
| KRH18265 | Soybean | extracellular, golgi, plasma membrane | 25.11 | 37.18 |
| KRH75524 | Soybean | extracellular, golgi, plasma membrane | 38.1 | 37.13 |
| KRH70628 | Soybean | plasma membrane | 38.53 | 36.78 |
| Zm00001d002837_P001 | Maize | plasma membrane | 63.64 | 34.43 |
| KRH42515 | Soybean | golgi, plasma membrane | 32.47 | 33.94 |
Protein Annotations
| Gene3D:1.20.120.1770 | EntrezGene:100527259 | MapMan:35.1 | EMBL:ACUP02006664 | EMBL:BT092090 | UniProt:C6T3S9 |
| InterPro:Cyt_b561/ferric_Rdtase_TM | EnsemblPlantsGene:GLYMA_10G236200 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0055114 | InterPro:IPR006593 |
| EnsemblPlants:KRH35325 | ProteinID:KRH35325 | ProteinID:KRH35325.1 | PFAM:PF03188 | PFscan:PS50939 | PANTHER:PTHR10106 |
| PANTHER:PTHR10106:SF22 | SMART:SM00665 | TMHMM:TMhelix | UniParc:UPI000189D397 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr10:+:46526782..46530177
Molecular Weight (calculated)
24947.0 Da
IEP (calculated)
6.973
GRAVY (calculated)
0.997
Length
231 amino acids
Sequence
(BLAST)
(BLAST)
001: MALGVPALPL TYVAHVLAVV ASVLVVVWVV NFRGGLAWDS DNKSLIFNIH PVLIVIGLLV HGGEAIISYK AFPLKKEVKK LIHLVFHAIA LILGIVGIYT
101: AFKFHNESGI ANLYSLHSWL GIGVIVLYGI QWIYGFVIFF FPGGTPDIRR ASLPWHALFG LFVFVLAVGT AALGFLEKLT FLENSGLDKY GSEALLVNFT
201: AIITILFGAF VVLSALADAP PAPAADDYEA I
101: AFKFHNESGI ANLYSLHSWL GIGVIVLYGI QWIYGFVIFF FPGGTPDIRR ASLPWHALFG LFVFVLAVGT AALGFLEKLT FLENSGLDKY GSEALLVNFT
201: AIITILFGAF VVLSALADAP PAPAADDYEA I
001: MENLRIDSSQ RPRLKINRTK EIRRVEKTTR RKKHSCRRER DMAVRINAMA VTFVAHALAV IAAIMVLVWS ISYRGGLAWE ATNKNLIFNL HPVLMLIGFI
101: ILGGEAIISY KSLPLEKPVK KLIHLILHAI ALALGIFGIC AAFKNHNESH IPNLYSLHSW IGIGVISLYG FQWVYSFIVF FFPGGSTNLK SGLLPWHAML
201: GLFVYILAVG NAALGFLEKL TFLENGGLDK YGSEAFLINF TAIITILFGA FVVLTASAES PSPSPSVSND DSVDFSYSAI
101: ILGGEAIISY KSLPLEKPVK KLIHLILHAI ALALGIFGIC AAFKNHNESH IPNLYSLHSW IGIGVISLYG FQWVYSFIVF FFPGGSTNLK SGLLPWHAML
201: GLFVYILAVG NAALGFLEKL TFLENGGLDK YGSEAFLINF TAIITILFGA FVVLTASAES PSPSPSVSND DSVDFSYSAI
Arabidopsis Description
ACYB-2Cytochrome b561/ferric reductase transmembrane protein family [Source:UniProtKB/TrEMBL;Acc:A0A1P8B653]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.