CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 7
golgi 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, plasma membrane
Any Predictor:	mitochondrion, secretory
BaCelLo:	secretory
EpiLoc:	mitochondrion
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH70628	Soybean	plasma membrane	94.51	92.56
VIT_01s0011g02840.t01	Wine grape	plasma membrane	75.95	74.38
PGSC0003DMT400002104	Potato	plasma membrane	71.73	70.25
Solyc05g009950.2.1	Tomato	plasma membrane	70.46	69.87
AT1G26100.1	Thale cress	plasma membrane	68.78	69.07
Bra011008.1-P	Field mustard	extracellular, golgi, plasma membrane	66.24	67.38
CDY55954	Canola	extracellular	66.24	67.38
CDY36092	Canola	extracellular	65.82	66.95
CDY20529	Canola	plasma membrane	62.45	61.92
GSMUA_Achr8P29770_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	49.79	47.58
KRG93825	Soybean	endoplasmic reticulum	45.15	46.12
KRG89271	Soybean	plasma membrane	37.97	40.91
KRH18265	Soybean	extracellular, golgi, plasma membrane	26.58	40.38
KRG91503	Soybean	nucleus	37.97	38.96
KRH35325	Soybean	mitochondrion, nucleus	37.13	38.1
KRH49716	Soybean	plasma membrane	31.22	34.74
KRH58610	Soybean	plasma membrane	30.38	33.96
KRH42515	Soybean	golgi, plasma membrane	29.54	31.67
KRG89270	Soybean	plasma membrane	24.47	31.02

Protein Annotations

Gene3D:1.20.120.1770	EntrezGene:100781811	MapMan:35.1	EMBL:ACUP02000372	InterPro:Cyt_b561/ferric_Rdtase_TM	EnsemblPlantsGene:GLYMA_01G089700
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020
GO:GO:0016021	GO:GO:0016491	GO:GO:0055114	UniProt:I1J6R9	InterPro:IPR006593	EnsemblPlants:KRH75524
ProteinID:KRH75524	ProteinID:KRH75524.1	PFAM:PF03188	PFscan:PS50939	PANTHER:PTHR10106	PANTHER:PTHR10106:SF20
SMART:SM00665	TMHMM:TMhelix	UniParc:UPI00023371BA	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:-:27110406..27113661

Molecular Weight (calculated)

26198.8 Da

IEP (calculated)

10.583

GRAVY (calculated)

0.763

Length

237 amino acids

Sequence
(BLAST)

001: MATVSPSLLF FARVLGLAVA VLVLIWALAF KSSFLTPSLS QQDLIYAVLH PLLMVIGFIL LSGEAILVHR WLVGSRGLKK LVHLWLQGVA LASGIFGIWT
101: KFQGKDGIVA NFYSLHSWMG LASVSLFGAQ WLIGFLNFWH RGEVRTVRIR ILPWHVFLGL YTYALAIATA ETGLLEKLTF LQTKRNVPKH STESMVVNSL
201: GLGLALLSGF VILVAVSPNY QILQSKLLYS ETRCLSS

Best Arabidopsis Sequence Match ( AT1G26100.1 )
(BLAST)

001: MGSVDPSRLS LVLFARLSGL VVAVSVLYWA LFLPNLGLSY STLHPLLMVI GFILVSGEAI LIHRWLPGSR KTKKAVHLWL QGMALASAVF GIWTKFHYQR
101: GVFANFYSLH SWMGLLSVSL FAAQWVTGFM SFWHRGEVRT TRTTFLPWHV FLGLYTYGLA IATAETGLLE KLTFLQTKRN VPRRGSESMT VNGLGLGLAL
201: LGCIVITAAI LPKYQSHSRD EKLVYSSQDR PKCLSS

Arabidopsis Description

CYB561DProbable transmembrane ascorbate ferrireductase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C540]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.