Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 7
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH75524 | Soybean | extracellular, golgi, plasma membrane | 47.58 | 49.79 |
| Solyc05g009950.2.1 | Tomato | plasma membrane | 47.58 | 49.37 |
| AT1G26100.1 | Thale cress | plasma membrane | 46.77 | 49.15 |
| Bra011008.1-P | Field mustard | extracellular, golgi, plasma membrane | 45.97 | 48.93 |
| CDY36092 | Canola | extracellular | 45.97 | 48.93 |
| CDY55954 | Canola | extracellular | 45.97 | 48.93 |
| KRH70628 | Soybean | plasma membrane | 47.58 | 48.76 |
| PGSC0003DMT400002104 | Potato | plasma membrane | 47.58 | 48.76 |
| VIT_01s0011g02840.t01 | Wine grape | plasma membrane | 46.37 | 47.52 |
| CDY20529 | Canola | plasma membrane | 41.94 | 43.51 |
| GSMUA_Achr1P25200_001 | Banana | extracellular, golgi, plasma membrane | 39.11 | 41.81 |
| GSMUA_Achr4P06470_001 | Banana | golgi, peroxisome, plasma membrane, plastid | 38.31 | 35.06 |
| GSMUA_Achr1P06830_001 | Banana | plasma membrane | 32.66 | 34.91 |
| GSMUA_Achr1P00250_001 | Banana | plasma membrane | 30.65 | 32.34 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane, plastid | 28.63 | 32.27 |
| GSMUA_Achr4P26140_001 | Banana | plasma membrane | 29.84 | 31.49 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P29770_001 | EnsemblPlants:GSMUA_Achr8T29770_001 | EnsemblPlantsGene:GSMUA_Achr8G29770_001 | Gene3D:1.20.120.1770 | GO:GO:0005575 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055114 | InterPro:Cyt_b561/ferric_Rdtase_TM | InterPro:IPR006593 |
| PANTHER:PTHR10106 | PANTHER:PTHR10106:SF20 | PFAM:PF03188 | PFscan:PS50939 | SEG:seg | SMART:SM00665 |
| TMHMM:TMhelix | UniParc:UPI0002952593 | UniProt:M0TUS9 | MapMan:35.1 | : | : |
Description
Putative Cytochrome b reductase 1 [Source:GMGC_GENE;Acc:GSMUA_Achr8G29770_001]
Coordinates
chr8:+:32049446..32051487
Molecular Weight (calculated)
26854.3 Da
IEP (calculated)
10.748
GRAVY (calculated)
0.705
Length
248 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVSIVLSHI SALLVAVLVL LWALAFRTTI FLRFYSSSVD GGATATATAV LHTLLMVIGF ILFGGEGILA HRWGVGLGWA RGPRKAAHLW LQGAALGFGV
101: AGVWTKFKGN KGVLANFHSL HSWMGLLCLL LFAAQWTMGF LSFWTRGEGR RARTLLLPWH IFIGIFTYSL AVATAESGLM EKMAFLHTKH GIPGSSLEFT
201: LINVLGLTLA IHCGLVVFTL IPAKHKESST STMVSSDGEH LNSKFVFS
101: AGVWTKFKGN KGVLANFHSL HSWMGLLCLL LFAAQWTMGF LSFWTRGEGR RARTLLLPWH IFIGIFTYSL AVATAESGLM EKMAFLHTKH GIPGSSLEFT
201: LINVLGLTLA IHCGLVVFTL IPAKHKESST STMVSSDGEH LNSKFVFS
001: MGSVDPSRLS LVLFARLSGL VVAVSVLYWA LFLPNLGLSY STLHPLLMVI GFILVSGEAI LIHRWLPGSR KTKKAVHLWL QGMALASAVF GIWTKFHYQR
101: GVFANFYSLH SWMGLLSVSL FAAQWVTGFM SFWHRGEVRT TRTTFLPWHV FLGLYTYGLA IATAETGLLE KLTFLQTKRN VPRRGSESMT VNGLGLGLAL
201: LGCIVITAAI LPKYQSHSRD EKLVYSSQDR PKCLSS
101: GVFANFYSLH SWMGLLSVSL FAAQWVTGFM SFWHRGEVRT TRTTFLPWHV FLGLYTYGLA IATAETGLLE KLTFLQTKRN VPRRGSESMT VNGLGLGLAL
201: LGCIVITAAI LPKYQSHSRD EKLVYSSQDR PKCLSS
Arabidopsis Description
CYB561DProbable transmembrane ascorbate ferrireductase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C540]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.