Factsheet for GSMUA_Achr1P06830_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 1
golgi 4
plasma membrane 6
extracellular 3
endoplasmic reticulum 3
vacuole 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P26140_001	Banana	plasma membrane	73.71	72.77
GSMUA_Achr1P00250_001	Banana	plasma membrane	69.83	68.94
VIT_16s0050g00090.t01	Wine grape	plasma membrane	60.78	61.3
Solyc03g025840.2.1	Tomato	plasma membrane	59.48	59.74
PGSC0003DMT400037195	Potato	plasma membrane	59.48	59.74
KRH35325	Soybean	mitochondrion, nucleus	59.05	59.31
CDX92719	Canola	plasma membrane	59.05	58.3
CDY50196	Canola	plasma membrane	59.05	58.3
CDY57373	Canola	plasma membrane	59.05	58.3
Bra019153.1-P	Field mustard	plasma membrane	59.05	58.3
KRG91503	Soybean	nucleus	57.33	57.58
Bra022581.1-P	Field mustard	plasma membrane	53.02	52.79
CDY27081	Canola	plasma membrane	52.59	52.36
CDX91626	Canola	plasma membrane	51.72	51.5
GSMUA_Achr1P25200_001	Banana	extracellular, golgi, plasma membrane	50.0	50.0
AT4G25570.2	Thale cress	plasma membrane	58.62	48.57
CDX94439	Canola	extracellular	25.0	44.27
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid	40.09	42.27
GSMUA_Achr4P06470_001	Banana	golgi, peroxisome, plasma membrane, plastid	46.98	40.22
GSMUA_Achr8P29770_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	34.91	32.66

Protein Annotations

EnsemblPlants:GSMUA_Achr1P06830_001	EnsemblPlants:GSMUA_Achr1T06830_001	EnsemblPlantsGene:GSMUA_Achr1G06830_001	Gene3D:1.20.120.1770	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0055114	InterPro:Cyt_b561/ferric_Rdtase_TM	InterPro:IPR006593
PANTHER:PTHR10106	PANTHER:PTHR10106:SF22	PFAM:PF03188	PFscan:PS50939	SEG:seg	SMART:SM00665
TMHMM:TMhelix	UniParc:UPI0002952F47	UniProt:M0RXP1	MapMan:35.1	:	:

Description

Putative Cytochrome b561 [Source:GMGC_GENE;Acc:GSMUA_Achr1G06830_001]

Coordinates

chr1:+:5416295..5417486

Molecular Weight (calculated)

25802.3 Da

IEP (calculated)

9.203

GRAVY (calculated)

0.907

Length

232 amino acids

Sequence
(BLAST)

001: MGGLVRSKSK AFMYIAHLLA ATAAVMVLVW CIHFRGGLAF ESANKSLIFN VHPVLMLIGF IIMGGEATMS YRTLPWSKRV KKTIHLILHA IALVLGVFGI
101: YFAFKFHNES GIDNLYSLHS WMGLGTICLY GIQWIFGFVT FLYPGASVFL RTAYLAWHVL FGVFVYLLAI ATAELGFLEK LTFLETSGIL HRYSPEAFLV
201: NSTALVVILL GASVVLSLIV PYIDYSNIYT VD

Best Arabidopsis Sequence Match ( AT4G25570.2 )
(BLAST)

001: MENLRIDSSQ RPRLKINRTK EIRRVEKTTR RKKHSCRRER DMAVRINAMA VTFVAHALAV IAAIMVLVWS ISYRGGLAWE ATNKNLIFNL HPVLMLIGFI
101: ILGGEAIISY KSLPLEKPVK KLIHLILHAI ALALGIFGIC AAFKNHNESH IPNLYSLHSW IGIGVISLYG FQWVYSFIVF FFPGGSTNLK SGLLPWHAML
201: GLFVYILAVG NAALGFLEKL TFLENGGLDK YGSEAFLINF TAIITILFGA FVVLTASAES PSPSPSVSND DSVDFSYSAI

Arabidopsis Description

ACYB-2Cytochrome b561/ferric reductase transmembrane protein family [Source:UniProtKB/TrEMBL;Acc:A0A1P8B653]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.