Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 5
- golgi 3
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0717200-00 | Rice | golgi, plasma membrane, vacuole | 58.18 | 56.14 |
| EER93563 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 55.45 | 53.98 |
| Zm00001d033778_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 54.09 | 52.65 |
| TraesCS4B01G049900.1 | Wheat | plasma membrane | 52.73 | 50.88 |
| TraesCS4A01G264900.1 | Wheat | plasma membrane | 52.73 | 50.88 |
| TraesCS4D01G050300.1 | Wheat | plasma membrane | 52.27 | 50.44 |
| KRG89270 | Soybean | plasma membrane | 38.64 | 45.45 |
| Bra026808.1-P | Field mustard | plasma membrane | 45.0 | 44.2 |
| CDY33743 | Canola | plasma membrane | 45.0 | 44.2 |
| KRH49716 | Soybean | plasma membrane | 42.73 | 44.13 |
| CDX81667 | Canola | plasma membrane | 44.55 | 43.75 |
| PGSC0003DMT400058674 | Potato | plasma membrane | 30.0 | 43.42 |
| AT1G14730.1 | Thale cress | plasma membrane | 43.64 | 42.86 |
| CDY41099 | Canola | plasma membrane | 43.64 | 42.86 |
| CDY45283 | Canola | plasma membrane | 43.64 | 42.86 |
| Bra026193.1-P | Field mustard | plasma membrane | 43.18 | 42.41 |
| GSMUA_Achr4P26140_001 | Banana | plasma membrane | 45.0 | 42.13 |
| KRH58610 | Soybean | plasma membrane | 40.45 | 41.98 |
| VIT_01s0011g06240.t01 | Wine grape | plasma membrane | 41.36 | 41.94 |
| GSMUA_Achr1P00250_001 | Banana | plasma membrane | 43.64 | 40.85 |
| Solyc01g005150.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 40.91 | 40.18 |
| GSMUA_Achr1P06830_001 | Banana | plasma membrane | 42.27 | 40.09 |
| KRH42515 | Soybean | golgi, plasma membrane | 39.09 | 38.91 |
| HORVU4Hr1G008200.8 | Barley | cytosol, mitochondrion, plasma membrane | 40.45 | 38.2 |
| GSMUA_Achr1P25200_001 | Banana | extracellular, golgi, plasma membrane | 39.55 | 37.5 |
| GSMUA_Achr4P06470_001 | Banana | golgi, peroxisome, plasma membrane, plastid | 38.18 | 31.0 |
| GSMUA_Achr8P29770_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 32.27 | 28.63 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P17880_001 | EnsemblPlants:GSMUA_Achr10T17880_001 | EnsemblPlantsGene:GSMUA_Achr10G17880_001 | Gene3D:1.20.120.1770 | GO:GO:0005575 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055114 | InterPro:Cyt_b561/ferric_Rdtase_TM | InterPro:IPR006593 |
| PANTHER:PTHR10106 | PANTHER:PTHR10106:SF36 | PFAM:PF03188 | PFscan:PS50939 | SEG:seg | SMART:SM00665 |
| TMHMM:TMhelix | UniParc:UPI000295FC24 | UniProt:M0RJ63 | MapMan:35.1 | : | : |
Description
cytochrome b561, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G17880_001]
Coordinates
chr10:-:24904092..24905015
Molecular Weight (calculated)
24036.4 Da
IEP (calculated)
8.982
GRAVY (calculated)
0.976
Length
220 amino acids
Sequence
(BLAST)
(BLAST)
001: MPNTVKPAFL VAAHVTKVAH VLALTVFVLV LAWVLHFRGG AARLHSDDPN LIFNVHPLVM CMGFILVIGE GIMAYKTIPA RKETQKSVHL MLHLVALVLG
101: ILGIYAAFKY HSANTMPDML SLHSWLGMCT ICLFGLQWLF GFVNFWFLKA SEPTRILLLP LHVSAGLAIF LLTVCTAETG FVQIDAAPGA ESRLINFTGL
201: FILLFAVAVS ISVALPRVSI
101: ILGIYAAFKY HSANTMPDML SLHSWLGMCT ICLFGLQWLF GFVNFWFLKA SEPTRILLLP LHVSAGLAIF LLTVCTAETG FVQIDAAPGA ESRLINFTGL
201: FILLFAVAVS ISVALPRVSI
001: MNLSGDRTTL KRHSSLSTLV AHFFGILAVV LMLIWLLHYR EGIEYGSDNP LKVLNVHPFL MYCGFLFLVG QAMMTYKTAY ASHQVQKMVH GGLHLIGLVL
101: GIVGICAAFR FHDKVNLKDM VSLHSWIGLT TFILLGVQWL FGAFTFLAPQ SSSGTRTRMM PWHVLGGRAL LYMGIVAALT GLMQRATMLG QSTNAESRLI
201: NFLGLAILLF GVSVDFSVAL GRYN
101: GIVGICAAFR FHDKVNLKDM VSLHSWIGLT TFILLGVQWL FGAFTFLAPQ SSSGTRTRMM PWHVLGGRAL LYMGIVAALT GLMQRATMLG QSTNAESRLI
201: NFLGLAILLF GVSVDFSVAL GRYN
Arabidopsis Description
CYB561CProbable transmembrane ascorbate ferrireductase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q67ZF6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.