Factsheet for GSMUA_Achr1P25200_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, extracellular

Predictor Summary:

plastid 1
mitochondrion 1
extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	mitochondrion
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0083g00180.t01	Wine grape	plasma membrane	73.28	73.28
Solyc02g065580.2.1	Tomato	plasma membrane	72.84	72.84
PGSC0003DMT400002997	Potato	plasma membrane	71.98	71.98
KRG93825	Soybean	endoplasmic reticulum	71.55	71.55
GSMUA_Achr4P06470_001	Banana	golgi, peroxisome, plasma membrane, plastid	75.86	64.94
KRH18265	Soybean	extracellular, golgi, plasma membrane	43.1	64.1
Bra028195.1-P	Field mustard	extracellular, golgi, plasma membrane	62.93	63.48
CDX74514	Canola	extracellular	62.5	63.04
AT5G38630.1	Thale cress	extracellular	62.5	63.04
CDY01648	Canola	extracellular	62.07	62.61
Zm00001d032327_P001	Maize	plasma membrane	62.5	61.7
Os08t0384000-01	Rice	plasma membrane	62.07	61.54
EES13771	Sorghum	plasma membrane	62.07	61.28
TraesCS7B01G199100.1	Wheat	plasma membrane	60.34	59.83
TraesCS7A01G292700.1	Wheat	plasma membrane	59.91	59.4
TraesCS7D01G286900.1	Wheat	plasma membrane	59.91	59.4
HORVU7Hr1G065590.3	Barley	plasma membrane	59.48	58.97
GSMUA_Achr1P06830_001	Banana	plasma membrane	50.0	50.0
GSMUA_Achr1P00250_001	Banana	plasma membrane	49.14	48.51
GSMUA_Achr4P26140_001	Banana	plasma membrane	47.41	46.81
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid	37.5	39.55
GSMUA_Achr8P29770_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	41.81	39.11

Protein Annotations

EnsemblPlants:GSMUA_Achr1P25200_001	EnsemblPlants:GSMUA_Achr1T25200_001	EnsemblPlantsGene:GSMUA_Achr1G25200_001	Gene3D:1.20.120.1770	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0055114	InterPro:Cyt_b561/ferric_Rdtase_TM	InterPro:IPR006593
PANTHER:PTHR10106	PFAM:PF03188	PFscan:PS50939	SEG:seg	SMART:SM00665	TMHMM:TMhelix
UniParc:UPI0002966539	UniProt:M0S2X7	MapMan:35.1	:	:	:

Description

Putative Cytochrome b ascorbate-dependent protein 3 [Source:GMGC_GENE;Acc:GSMUA_Achr1G25200_001]

Coordinates

chr1:-:19611883..19618644

Molecular Weight (calculated)

25300.5 Da

IEP (calculated)

10.031

GRAVY (calculated)

0.791

Length

232 amino acids

Sequence
(BLAST)

001: MGAPVVWFPI VPLIRLTGAA AATFVLIWAV HFRGGLALIS DNKDLIFNVH PVLMVIGFIL LNGEAILAYK TMPGTKSFKK AVHLSIQFLA LCLGLIGTWA
101: ALKFHNDKGI DNFYSLHSWL GLACILLFSI QWGMGFATFW YPGGSRSSRA FLLPWHVFFG AYIYALAVVT AITGLLEKAT FLQASKTILR YSNEALLINS
201: LGILLVLLGG FVILALVTPG TARSDLQRGN SE

Best Arabidopsis Sequence Match ( AT5G38630.1 )
(BLAST)

001: MAVPVLGGFP IFMVVRVLGF IIAALVLTWT VHYRGGLALS SDNKDHIFNV HPVMMVIGLI LFNGEAMLAY KSVQGTKNLK KLVHLTLQLT AFILSLIGVW
101: AALKFHIDKG IENFYSLHSW LGLACLFLFA FQWAAGFVTY WYPGGSRNSR ASLMPWHVFL GISIYALALV TATTGILEKV TFLQVNQVIT RYSTEAMLVN
201: TMGVLILILG GFVILGVVTP VSGKDQVLTQ

Arabidopsis Description

CYB561BProbable transmembrane ascorbate ferrireductase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SWS1]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.