CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
golgi 5
plasma membrane 6
endoplasmic reticulum 5
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74514	Canola	extracellular	98.26	98.26
AT5G38630.1	Thale cress	extracellular	91.3	91.3
VIT_14s0083g00180.t01	Wine grape	plasma membrane	72.17	71.55
KRG93825	Soybean	endoplasmic reticulum	70.0	69.4
Solyc02g065580.2.1	Tomato	plasma membrane	68.7	68.1
PGSC0003DMT400002997	Potato	plasma membrane	68.26	67.67
GSMUA_Achr1P25200_001	Banana	extracellular, golgi, plasma membrane	62.61	62.07
KRH18265	Soybean	extracellular, golgi, plasma membrane	41.3	60.9
TraesCS7D01G286900.1	Wheat	plasma membrane	56.52	55.56
TraesCS7A01G292700.1	Wheat	plasma membrane	56.52	55.56
HORVU7Hr1G065590.3	Barley	plasma membrane	56.52	55.56
TraesCS7B01G199100.1	Wheat	plasma membrane	56.09	55.13
Os08t0384000-01	Rice	plasma membrane	55.22	54.27
EES13771	Sorghum	plasma membrane	54.35	53.19
Zm00001d032327_P001	Maize	plasma membrane	53.04	51.91
GSMUA_Achr4P06470_001	Banana	golgi, peroxisome, plasma membrane, plastid	60.87	51.66
CDY57373	Canola	plasma membrane	42.17	41.28
CDY50196	Canola	plasma membrane	42.17	41.28
CDX92719	Canola	plasma membrane	42.17	41.28
CDY27081	Canola	plasma membrane	41.3	40.77
CDX91626	Canola	plasma membrane	40.0	39.48
CDY55954	Canola	extracellular	39.13	38.63
CDY36092	Canola	extracellular	39.13	38.63
CDY20529	Canola	plasma membrane	38.7	37.24
CDY33743	Canola	plasma membrane	33.04	33.93
CDX81667	Canola	plasma membrane	33.04	33.93
CDY45283	Canola	plasma membrane	31.3	32.14
CDY41099	Canola	plasma membrane	31.3	32.14
CDX94439	Canola	extracellular	17.83	31.3

Protein Annotations

EnsemblPlants:CDY01648	EnsemblPlantsGene:GSBRNA2T00112707001	Gene3D:1.20.120.1770	GO:A0A078EQ75	InterPro:Cyt_b561/ferric_Rdtase_TM	InterPro:IPR006593
PANTHER:PTHR10106	PFAM:PF03188	PFscan:PS50939	ProteinID:CDY01648	ProteinID:CDY01648.1	SEG:seg
SMART:SM00665	TMHMM:TMhelix	UniParc:UPI0004EEE609	MapMan:35.1	:	:

Description

BnaC04g31040D

Coordinates

chrLK031928:-:60671..62179

Molecular Weight (calculated)

25305.9 Da

IEP (calculated)

10.106

GRAVY (calculated)

0.920

Length

230 amino acids

Sequence
(BLAST)

001: MVVPMLGGFP IFLVVRVLGF IIAVLVLTWT VHYRGGLALS SGNKDLIFNV HPVLMVIGLI LFNGEAMLAY KSVQGTKNLK KLVHLTLQFA AFILSLVGVW
101: AALKFHIDKG IENFYSLHSW LGLACLFLFA FQWASGFVTY WYPGGSRNSR ASLMPWHVFL GVAIYALALV TVTTGILEKL TFLQVNQVIT RYSTEAMLVN
201: TMGVLILVLG GFVVLGVVTP LNAKDQVLTQ

Best Arabidopsis Sequence Match ( AT5G38630.1 )
(BLAST)

001: MAVPVLGGFP IFMVVRVLGF IIAALVLTWT VHYRGGLALS SDNKDHIFNV HPVMMVIGLI LFNGEAMLAY KSVQGTKNLK KLVHLTLQLT AFILSLIGVW
101: AALKFHIDKG IENFYSLHSW LGLACLFLFA FQWAAGFVTY WYPGGSRNSR ASLMPWHVFL GISIYALALV TATTGILEKV TFLQVNQVIT RYSTEAMLVN
201: TMGVLILILG GFVILGVVTP VSGKDQVLTQ

Arabidopsis Description

CYB561BProbable transmembrane ascorbate ferrireductase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SWS1]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.