Factsheet for PGSC0003DMT400002997

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 1
extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	mitochondrion
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g065580.2.1	Tomato	plasma membrane	98.71	98.71
VIT_14s0083g00180.t01	Wine grape	plasma membrane	78.02	78.02
KRG93825	Soybean	endoplasmic reticulum	76.29	76.29
GSMUA_Achr1P25200_001	Banana	extracellular, golgi, plasma membrane	71.98	71.98
Bra028195.1-P	Field mustard	extracellular, golgi, plasma membrane	68.97	69.57
CDX74514	Canola	extracellular	68.97	69.57
AT5G38630.1	Thale cress	extracellular	68.97	69.57
CDY01648	Canola	extracellular	67.67	68.26
KRH18265	Soybean	extracellular, golgi, plasma membrane	44.83	66.67
EES13771	Sorghum	plasma membrane	63.36	62.55
Zm00001d032327_P001	Maize	plasma membrane	62.5	61.7
Os08t0384000-01	Rice	plasma membrane	61.64	61.11
TraesCS7A01G292700.1	Wheat	plasma membrane	61.21	60.68
TraesCS7B01G199100.1	Wheat	plasma membrane	61.21	60.68
TraesCS7D01G286900.1	Wheat	plasma membrane	61.21	60.68
HORVU7Hr1G065590.3	Barley	plasma membrane	61.21	60.68
GSMUA_Achr4P06470_001	Banana	golgi, peroxisome, plasma membrane, plastid	65.52	56.09
PGSC0003DMT400037195	Potato	plasma membrane	40.95	41.13
PGSC0003DMT400058673	Potato	endoplasmic reticulum	37.93	39.82
PGSC0003DMT400002104	Potato	plasma membrane	41.38	39.67
PGSC0003DMT400058674	Potato	plasma membrane	24.57	37.5

Protein Annotations

Gene3D:1.20.120.1770	EntrezGene:102602133	MapMan:35.1	InterPro:Cyt_b561/ferric_Rdtase_TM	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020
GO:GO:0016021	GO:GO:0055114	InterPro:IPR006593	UniProt:M0ZL03	PFAM:PF03188	EnsemblPlantsGene:PGSC0003DMG400001180
PGSC:PGSC0003DMG400001180	EnsemblPlants:PGSC0003DMT400002997	PFscan:PS50939	PANTHER:PTHR10106	SMART:SM00665	TMHMM:TMhelix
UniParc:UPI000296652E	RefSeq:XP_006344832.1	SEG:seg	:	:	:

Description

Cytochrome b561 [Source:PGSC_GENE;Acc:PGSC0003DMG400001180]

Coordinates

chr2:-:24744793..24750751

Molecular Weight (calculated)

25516.9 Da

IEP (calculated)

10.008

GRAVY (calculated)

0.915

Length

232 amino acids

Sequence
(BLAST)

001: MAVPVVRFPI FLLVRVIGIA VAALVLIWNV HYRGGLALIS DNKALIFNVH PVVMVIGLVL LNGEAMLAYK TVSGTKSFRK SVHLVLQFLA FFLSLIGLWA
101: AWKFHNDKGI DNFYSLHSWL GLFCLFLFGV QWAVGFATFW YPGGSRNSRA TLLPWHAFFG IYIYALAIAT CATGFLEKAT FLQASHIISR YSTEALLVNC
201: LGVLIVVLGG LVILAVVSPM NGRSDIIRGP AE

Best Arabidopsis Sequence Match ( AT5G38630.1 )
(BLAST)

001: MAVPVLGGFP IFMVVRVLGF IIAALVLTWT VHYRGGLALS SDNKDHIFNV HPVMMVIGLI LFNGEAMLAY KSVQGTKNLK KLVHLTLQLT AFILSLIGVW
101: AALKFHIDKG IENFYSLHSW LGLACLFLFA FQWAAGFVTY WYPGGSRNSR ASLMPWHVFL GISIYALALV TATTGILEKV TFLQVNQVIT RYSTEAMLVN
201: TMGVLILILG GFVILGVVTP VSGKDQVLTQ

Arabidopsis Description

CYB561BProbable transmembrane ascorbate ferrireductase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SWS1]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.