Factsheet for GSMUA_Achr4P06470_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, plastid, plasma membrane

Predictor Summary:

plastid 2
golgi 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, peroxisome, plasma membrane, plastid
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	plastid
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P25200_001	Banana	extracellular, golgi, plasma membrane	64.94	75.86
VIT_14s0083g00180.t01	Wine grape	plasma membrane	58.67	68.53
KRG93825	Soybean	endoplasmic reticulum	57.56	67.24
Solyc02g065580.2.1	Tomato	plasma membrane	56.46	65.95
PGSC0003DMT400002997	Potato	plasma membrane	56.09	65.52
KRH18265	Soybean	extracellular, golgi, plasma membrane	36.53	63.46
Bra028195.1-P	Field mustard	extracellular, golgi, plasma membrane	52.03	61.3
CDX74514	Canola	extracellular	52.03	61.3
AT5G38630.1	Thale cress	extracellular	52.03	61.3
CDY01648	Canola	extracellular	51.66	60.87
Os08t0384000-01	Rice	plasma membrane	48.71	56.41
EES13771	Sorghum	plasma membrane	48.34	55.74
Zm00001d032327_P001	Maize	plasma membrane	47.97	55.32
TraesCS7B01G199100.1	Wheat	plasma membrane	46.49	53.85
HORVU7Hr1G065590.3	Barley	plasma membrane	45.76	52.99
TraesCS7A01G292700.1	Wheat	plasma membrane	45.76	52.99
TraesCS7D01G286900.1	Wheat	plasma membrane	45.76	52.99
GSMUA_Achr1P00250_001	Banana	plasma membrane	42.44	48.94
GSMUA_Achr4P26140_001	Banana	plasma membrane	41.33	47.66
GSMUA_Achr1P06830_001	Banana	plasma membrane	40.22	46.98
GSMUA_Achr8P29770_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	35.06	38.31
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid	31.0	38.18

Protein Annotations

EnsemblPlants:GSMUA_Achr4P06470_001	EnsemblPlants:GSMUA_Achr4T06470_001	EnsemblPlantsGene:GSMUA_Achr4G06470_001	Gene3D:1.20.120.1770	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0055114	InterPro:Cyt_b561/ferric_Rdtase_TM	InterPro:IPR006593
PANTHER:PTHR10106	PFAM:PF03188	PFscan:PS50939	SEG:seg	SMART:SM00665	TMHMM:TMhelix
UniParc:UPI000295ABC3	UniProt:M0SLL4	MapMan:35.1	:	:	:

Description

Putative Cytochrome b561 [Source:GMGC_GENE;Acc:GSMUA_Achr4G06470_001]

Coordinates

chr4:+:4895046..4898394

Molecular Weight (calculated)

28972.6 Da

IEP (calculated)

8.222

GRAVY (calculated)

0.665

Length

271 amino acids

Sequence
(BLAST)

001: MLQQASAATE SAAAAESGEP HPPDSDPSSA IPLPPSDGGA AAPLVGLPIV PLVRLMGAAA ASLVVTWVVR FRGGLALNSD NRDLVFNVHP VLMVIGFILL
101: YGEAILAYKT LSGTKNFKKA MHLTIQFLAL CLGFIGVWAA LKFHNGKGID NFYSLHSWLG LTCLLLFGIQ WGIGFATFWY PGGTRNGRAF LLPWHVFFGL
201: YIYALAVITA TTGLLEKATF LQSSSIVLRY SNEAFLINFL GILIVALGGF VVFAVITPGS VKPDAYIGIQ E

Best Arabidopsis Sequence Match ( AT5G38630.1 )
(BLAST)

001: MAVPVLGGFP IFMVVRVLGF IIAALVLTWT VHYRGGLALS SDNKDHIFNV HPVMMVIGLI LFNGEAMLAY KSVQGTKNLK KLVHLTLQLT AFILSLIGVW
101: AALKFHIDKG IENFYSLHSW LGLACLFLFA FQWAAGFVTY WYPGGSRNSR ASLMPWHVFL GISIYALALV TATTGILEKV TFLQVNQVIT RYSTEAMLVN
201: TMGVLILILG GFVILGVVTP VSGKDQVLTQ

Arabidopsis Description

CYB561BProbable transmembrane ascorbate ferrireductase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SWS1]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.