Factsheet for PGSC0003DMT400037195

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 8
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g025840.2.1	Tomato	plasma membrane	99.13	99.13
VIT_16s0050g00090.t01	Wine grape	plasma membrane	72.29	72.61
Bra019153.1-P	Field mustard	plasma membrane	72.29	71.06
CDY57373	Canola	plasma membrane	72.29	71.06
CDY50196	Canola	plasma membrane	72.29	71.06
CDX92719	Canola	plasma membrane	72.29	71.06
KRG91503	Soybean	nucleus	68.83	68.83
KRH35325	Soybean	mitochondrion, nucleus	68.4	68.4
Bra022581.1-P	Field mustard	plasma membrane	64.94	64.38
CDY27081	Canola	plasma membrane	64.5	63.95
CDX91626	Canola	plasma membrane	63.2	62.66
TraesCS6A01G237300.1	Wheat	plasma membrane	61.04	60.26
TraesCS6B01G265800.2	Wheat	plasma membrane	61.47	59.92
AT4G25570.2	Thale cress	plasma membrane	72.29	59.64
GSMUA_Achr4P26140_001	Banana	plasma membrane	60.61	59.57
GSMUA_Achr1P06830_001	Banana	plasma membrane	59.74	59.48
TraesCS6D01G219900.1	Wheat	plasma membrane	60.17	59.4
KXG26783	Sorghum	plasma membrane	60.17	59.4
Os04t0533500-02	Rice	plasma membrane	60.61	59.32
HORVU2Hr1G091720.2	Barley	plasma membrane	61.04	59.24
EES05833	Sorghum	plasma membrane	60.61	59.07
TraesCS2A01G369700.1	Wheat	plasma membrane	60.61	58.82
TraesCS2B01G386700.1	Wheat	plasma membrane	60.61	58.82
TraesCS2D01G366100.1	Wheat	plasma membrane	60.61	58.82
GSMUA_Achr1P00250_001	Banana	plasma membrane	59.31	58.3
Os10t0504200-01	Rice	plasma membrane	56.28	56.52
TraesCS1A01G174900.1	Wheat	plasma membrane	44.59	54.5
TraesCS1B01G189800.1	Wheat	plasma membrane	53.68	53.91
TraesCS1D01G164200.1	Wheat	plasma membrane	53.25	53.48
Zm00001d032521_P004	Maize	plasma membrane	52.81	53.04
EER91407	Sorghum	plasma membrane	51.52	51.74
Os02t0642300-01	Rice	extracellular, golgi, mitochondrion	22.94	51.46
Zm00001d052746_P001	Maize	plasma membrane	51.08	51.08
CDX94439	Canola	extracellular	28.14	49.62
Os08t0101700-01	Rice	golgi, plasma membrane, plastid	50.65	49.16
HORVU1Hr1G046270.2	Barley	plastid	54.55	47.01
HORVU7Hr1G078690.1	Barley	endoplasmic reticulum, plasma membrane, plastid	48.05	46.44
TraesCS7A01G328700.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	47.19	45.99
HORVU6Hr1G060720.1	Barley	vacuole	61.04	45.78
TraesCS7B01G229400.1	Wheat	golgi, plasma membrane, vacuole	46.75	45.57
TraesCS7D01G325600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	46.75	45.57
Zm00001d051272_P001	Maize	plastid	60.61	44.87
PGSC0003DMT400058673	Potato	endoplasmic reticulum	39.39	41.18
PGSC0003DMT400002997	Potato	plasma membrane	41.13	40.95
OQU75566	Sorghum	plasma membrane	50.22	40.85
PGSC0003DMT400058674	Potato	plasma membrane	25.97	39.47
PGSC0003DMT400002104	Potato	plasma membrane	37.66	35.95
Zm00001d002837_P001	Maize	plasma membrane	59.74	32.32

Protein Annotations

Gene3D:1.20.120.1770	EntrezGene:102596012	MapMan:35.1	InterPro:Cyt_b561/ferric_Rdtase_TM	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0055114	InterPro:IPR006593	UniProt:M1B4Z3
PFAM:PF03188	EnsemblPlantsGene:PGSC0003DMG400014340	PGSC:PGSC0003DMG400014340	EnsemblPlants:PGSC0003DMT400037195	PFscan:PS50939	PANTHER:PTHR10106
PANTHER:PTHR10106:SF22	SMART:SM00665	TMHMM:TMhelix	UniParc:UPI0002961894	RefSeq:XP_006353305.1	SEG:seg

Description

Cytochrome B561 [Source:PGSC_GENE;Acc:PGSC0003DMG400014340]

Coordinates

chr3:-:42903054..42906481

Molecular Weight (calculated)

25499.7 Da

IEP (calculated)

8.425

GRAVY (calculated)

0.781

Length

231 amino acids

Sequence
(BLAST)

001: MATGLKALPF SFGAHFLALI AAIMVLVWSI HFRGGLAWEA ENKNLIFNIH PVLMLIGFII LGGEAIISYK SFPLEKQVKK KIHLVLHAIA LILGIIGIYT
101: AFKNHNETNI PNMYSLHSWI GIGVITLYGI QWIYGFVVFF YPGGSSEIRR DSLPWHVLLG MFIYVVAVGN ACLGFLEKLT FLEVNGLAKY GSEAFLVNFT
201: AIATVLYGVF VFLTILSQGP TADDHSYSAI A

Best Arabidopsis Sequence Match ( AT4G25570.2 )
(BLAST)

001: MENLRIDSSQ RPRLKINRTK EIRRVEKTTR RKKHSCRRER DMAVRINAMA VTFVAHALAV IAAIMVLVWS ISYRGGLAWE ATNKNLIFNL HPVLMLIGFI
101: ILGGEAIISY KSLPLEKPVK KLIHLILHAI ALALGIFGIC AAFKNHNESH IPNLYSLHSW IGIGVISLYG FQWVYSFIVF FFPGGSTNLK SGLLPWHAML
201: GLFVYILAVG NAALGFLEKL TFLENGGLDK YGSEAFLINF TAIITILFGA FVVLTASAES PSPSPSVSND DSVDFSYSAI

Arabidopsis Description

ACYB-2Cytochrome b561/ferric reductase transmembrane protein family [Source:UniProtKB/TrEMBL;Acc:A0A1P8B653]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.