Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G219900.1 | Wheat | plasma membrane | 97.44 | 97.44 |
| TraesCS6B01G265800.2 | Wheat | plasma membrane | 97.44 | 96.2 |
| Os02t0642300-01 | Rice | extracellular, golgi, mitochondrion | 36.75 | 83.5 |
| EES05833 | Sorghum | plasma membrane | 84.19 | 83.12 |
| TraesCS2A01G369700.1 | Wheat | plasma membrane | 81.2 | 79.83 |
| HORVU6Hr1G060720.1 | Barley | vacuole | 98.29 | 74.68 |
| GSMUA_Achr4P26140_001 | Banana | plasma membrane | 73.5 | 73.19 |
| GSMUA_Achr1P00250_001 | Banana | plasma membrane | 70.51 | 70.21 |
| TraesCS1A01G174900.1 | Wheat | plasma membrane | 51.71 | 64.02 |
| VIT_16s0050g00090.t01 | Wine grape | plasma membrane | 62.82 | 63.91 |
| Bra019153.1-P | Field mustard | plasma membrane | 64.1 | 63.83 |
| CDX92719 | Canola | plasma membrane | 64.1 | 63.83 |
| CDY50196 | Canola | plasma membrane | 64.1 | 63.83 |
| CDY57373 | Canola | plasma membrane | 64.1 | 63.83 |
| KRG91503 | Soybean | nucleus | 62.82 | 63.64 |
| KRH35325 | Soybean | mitochondrion, nucleus | 61.97 | 62.77 |
| Zm00001d051272_P001 | Maize | plastid | 83.33 | 62.5 |
| PGSC0003DMT400037195 | Potato | plasma membrane | 60.26 | 61.04 |
| Solyc03g025840.2.1 | Tomato | plasma membrane | 59.4 | 60.17 |
| Bra022581.1-P | Field mustard | plasma membrane | 52.56 | 52.79 |
| CDY27081 | Canola | plasma membrane | 52.14 | 52.36 |
| CDX91626 | Canola | plasma membrane | 51.28 | 51.5 |
| TraesCS7A01G328700.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 52.14 | 51.48 |
| AT4G25570.2 | Thale cress | plasma membrane | 61.54 | 51.43 |
| CDX94439 | Canola | extracellular | 27.78 | 49.62 |
| TraesCS7A01G292700.1 | Wheat | plasma membrane | 40.6 | 40.6 |
| TraesCS4A01G264900.1 | Wheat | plasma membrane | 36.75 | 37.72 |
| TraesCS3A01G507300.1 | Wheat | plasma membrane, vacuole | 33.33 | 37.5 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G237300.1 | EnsemblPlantsGene:TraesCS6A01G237300 | Gene3D:1.20.120.1770 | InterPro:Cyt_b561/ferric_Rdtase_TM | InterPro:IPR006593 | PANTHER:PTHR10106 |
| PANTHER:PTHR10106:SF17 | PFAM:PF03188 | PFscan:PS50939 | SEG:seg | SMART:SM00665 | TIGR:cd08766 |
| TMHMM:TMhelix | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr6A:-:446737798..446739688
Molecular Weight (calculated)
25440.6 Da
IEP (calculated)
7.320
GRAVY (calculated)
0.836
Length
234 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLGVRAAPF TYVAHALAVV AAAMVLYWCI HFRGGLAFEA DNKNLIFNVH PVLMLIGFII LGSEAIMIYK VLPTVNHDTT KLIHLVLHAI ALVLGAVGIY
101: CAFKNHNETG IANLYSLHSW LGIGTISLYG IQWIFGFLAF FFPKAAPNVR KGALPWHVLL GIFVYILALA TAELGFLEKL TFLQSSGIDK YGPESFLVNF
201: TALVVVLFGA SVVVAAVAPA RLEEPQDYAP IPEN
101: CAFKNHNETG IANLYSLHSW LGIGTISLYG IQWIFGFLAF FFPKAAPNVR KGALPWHVLL GIFVYILALA TAELGFLEKL TFLQSSGIDK YGPESFLVNF
201: TALVVVLFGA SVVVAAVAPA RLEEPQDYAP IPEN
001: MENLRIDSSQ RPRLKINRTK EIRRVEKTTR RKKHSCRRER DMAVRINAMA VTFVAHALAV IAAIMVLVWS ISYRGGLAWE ATNKNLIFNL HPVLMLIGFI
101: ILGGEAIISY KSLPLEKPVK KLIHLILHAI ALALGIFGIC AAFKNHNESH IPNLYSLHSW IGIGVISLYG FQWVYSFIVF FFPGGSTNLK SGLLPWHAML
201: GLFVYILAVG NAALGFLEKL TFLENGGLDK YGSEAFLINF TAIITILFGA FVVLTASAES PSPSPSVSND DSVDFSYSAI
101: ILGGEAIISY KSLPLEKPVK KLIHLILHAI ALALGIFGIC AAFKNHNESH IPNLYSLHSW IGIGVISLYG FQWVYSFIVF FFPGGSTNLK SGLLPWHAML
201: GLFVYILAVG NAALGFLEKL TFLENGGLDK YGSEAFLINF TAIITILFGA FVVLTASAES PSPSPSVSND DSVDFSYSAI
Arabidopsis Description
ACYB-2Cytochrome b561/ferric reductase transmembrane protein family [Source:UniProtKB/TrEMBL;Acc:A0A1P8B653]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.