Factsheet for HORVU6Hr1G060720.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

mitochondrion 2
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	mitochondrion, peroxisome
iPSORT:	mitochondrion
MultiLoc:	peroxisome
TargetP:	mitochondrion
YLoc:	cytosol

vacuole: 16581873

msms PMID: 16581873 doi

A Endler, S Meyer, S Schelbert, T Schneider, W Weschke, SW Peters, F Keller, S Baginsky, E Martinoia, UG Schmidt

University of Zurich, Institute of Plant Biology, CH-8008 Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G237300.1	Wheat	plasma membrane	74.68	98.29
TraesCS6B01G265800.2	Wheat	plasma membrane	75.32	97.89
TraesCS6D01G219900.1	Wheat	plasma membrane	74.03	97.44
EES05833	Sorghum	plasma membrane	65.58	85.23
Os02t0642300-01	Rice	extracellular, golgi, mitochondrion	27.6	82.52
HORVU2Hr1G091720.2	Barley	plasma membrane	63.64	82.35
GSMUA_Achr4P26140_001	Banana	plasma membrane	56.82	74.47
GSMUA_Achr1P00250_001	Banana	plasma membrane	54.55	71.49
Zm00001d051272_P001	Maize	plastid	71.1	70.19
VIT_16s0050g00090.t01	Wine grape	plasma membrane	48.38	64.78
Bra019153.1-P	Field mustard	plasma membrane	48.7	63.83
CDY57373	Canola	plasma membrane	48.7	63.83
CDY50196	Canola	plasma membrane	48.7	63.83
CDX92719	Canola	plasma membrane	48.7	63.83
KRG91503	Soybean	nucleus	47.4	63.2
KRH35325	Soybean	mitochondrion, nucleus	46.75	62.34
PGSC0003DMT400037195	Potato	plasma membrane	45.78	61.04
Solyc03g025840.2.1	Tomato	plasma membrane	45.13	60.17
HORVU1Hr1G046270.2	Barley	plastid	48.38	55.6
Bra022581.1-P	Field mustard	plasma membrane	39.61	52.36
CDY27081	Canola	plasma membrane	39.29	51.93
AT4G25570.2	Thale cress	plasma membrane	46.75	51.43
CDX91626	Canola	plasma membrane	38.64	51.07
HORVU7Hr1G078690.1	Barley	endoplasmic reticulum, plasma membrane, plastid	39.61	51.05
CDX94439	Canola	extracellular	21.1	49.62
HORVU7Hr1G065590.3	Barley	plasma membrane	32.14	42.31
HORVU3Hr1G111630.1	Barley	plasma membrane	26.3	36.32
HORVU4Hr1G008200.8	Barley	cytosol, mitochondrion, plasma membrane	22.73	30.04

Protein Annotations

EnsemblPlants:HORVU6Hr1G060720.1	EnsemblPlantsGene:HORVU6Hr1G060720	Gene3D:1.20.120.1770	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016021	GO:GO:0055114	InterPro:Cyt_b561/ferric_Rdtase_TM	InterPro:IPR006593	PANTHER:PTHR10106
PANTHER:PTHR10106:SF17	PFAM:PF03188	PFscan:PS50939	SEG:seg	SMART:SM00665	TMHMM:TMhelix
UniParc:UPI000B489341	UniProt:A0A287UD09	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:404715068..404718059

Molecular Weight (calculated)

34080.8 Da

IEP (calculated)

10.278

GRAVY (calculated)

0.348

Length

308 amino acids

Sequence
(BLAST)

001: FFSNRQLPGV SPLSWFLWRE INREHTRKKV SFIREARGRH APALSPLARS VRRETTTSQQ QRRREGQKSR GPEAMGLGVR AAPFTYVAHA LAVAAAAMVL
101: YWCIHFRGGL AFEADNKNLI FNVHPVLMLI GFIILGSEAI MVYKVLPTVN HDTTKLIHLV LHAIALVLGA VGIYCAFKNH NETGIANLYS LHSWLGIGTI
201: SLYGIQWIFG FLTFFFPKAA PNVRKGALPW HVLLGIFVYI LALATAELGF LEKLTFLQSS GIDKYGPESF LVNFTALVVV LFGASVVVAA VAPARLEEPQ
301: GYAPIPEN

Best Arabidopsis Sequence Match ( AT4G25570.2 )
(BLAST)

001: MENLRIDSSQ RPRLKINRTK EIRRVEKTTR RKKHSCRRER DMAVRINAMA VTFVAHALAV IAAIMVLVWS ISYRGGLAWE ATNKNLIFNL HPVLMLIGFI
101: ILGGEAIISY KSLPLEKPVK KLIHLILHAI ALALGIFGIC AAFKNHNESH IPNLYSLHSW IGIGVISLYG FQWVYSFIVF FFPGGSTNLK SGLLPWHAML
201: GLFVYILAVG NAALGFLEKL TFLENGGLDK YGSEAFLINF TAIITILFGA FVVLTASAES PSPSPSVSND DSVDFSYSAI

Arabidopsis Description

ACYB-2Cytochrome b561/ferric reductase transmembrane protein family [Source:UniProtKB/TrEMBL;Acc:A0A1P8B653]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.