Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 5
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G189800.1 | Wheat | plasma membrane | 94.18 | 77.39 |
| TraesCS1D01G164200.1 | Wheat | plasma membrane | 92.06 | 75.65 |
| Zm00001d032521_P004 | Maize | plasma membrane | 80.95 | 66.52 |
| HORVU1Hr1G046270.2 | Barley | plastid | 93.65 | 66.04 |
| EER91407 | Sorghum | plasma membrane | 78.84 | 64.78 |
| Os10t0504200-01 | Rice | plasma membrane | 77.78 | 63.91 |
| GSMUA_Achr4P26140_001 | Banana | plasma membrane | 70.9 | 57.02 |
| GSMUA_Achr1P00250_001 | Banana | plasma membrane | 69.84 | 56.17 |
| TraesCS2A01G369700.1 | Wheat | plasma membrane | 66.67 | 52.94 |
| TraesCS6A01G237300.1 | Wheat | plasma membrane | 64.02 | 51.71 |
| VIT_16s0050g00090.t01 | Wine grape | plasma membrane | 59.79 | 49.13 |
| Bra019153.1-P | Field mustard | plasma membrane | 58.73 | 47.23 |
| CDY57373 | Canola | plasma membrane | 58.73 | 47.23 |
| CDY50196 | Canola | plasma membrane | 58.73 | 47.23 |
| CDX92719 | Canola | plasma membrane | 58.73 | 47.23 |
| KRG91503 | Soybean | nucleus | 57.14 | 46.75 |
| KRH35325 | Soybean | mitochondrion, nucleus | 57.14 | 46.75 |
| CDX94439 | Canola | extracellular | 32.28 | 46.56 |
| Solyc03g025840.2.1 | Tomato | plasma membrane | 55.03 | 45.02 |
| PGSC0003DMT400037195 | Potato | plasma membrane | 54.5 | 44.59 |
| TraesCS7A01G328700.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 54.5 | 43.46 |
| CDY27081 | Canola | plasma membrane | 52.91 | 42.92 |
| CDX91626 | Canola | plasma membrane | 52.91 | 42.92 |
| Bra022581.1-P | Field mustard | plasma membrane | 52.91 | 42.92 |
| AT4G25570.2 | Thale cress | plasma membrane | 58.2 | 39.29 |
| TraesCS7A01G292700.1 | Wheat | plasma membrane | 43.92 | 35.47 |
| TraesCS4A01G264900.1 | Wheat | plasma membrane | 39.68 | 32.89 |
| TraesCS3A01G507300.1 | Wheat | plasma membrane, vacuole | 35.98 | 32.69 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G174900.1 | EnsemblPlantsGene:TraesCS1A01G174900 | Gene3D:1.20.120.1770 | InterPro:Cyt_b561/ferric_Rdtase_TM | InterPro:IPR006593 | PANTHER:PTHR10106 |
| PANTHER:PTHR10106:SF18 | PFAM:PF03188 | PFscan:PS50939 | SEG:seg | SignalP:SignalP-TM | SMART:SM00665 |
| TIGR:cd08766 | TMHMM:TMhelix | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr1A:-:312584969..312607067
Molecular Weight (calculated)
20619.5 Da
IEP (calculated)
9.556
GRAVY (calculated)
0.727
Length
189 amino acids
Sequence
(BLAST)
(BLAST)
001: MQVHPVLMLI GFIIIGSEAI MSYKTLPWSH DTNKKVHLIL HAVALFLGSF GIYAAFKFHN ESGIANLYSL HSWVGLGTII LYGLQWVSGF LTFFFPGASP
101: TLRRAVLPWH VRAGLVVYVL ALLAAELGFL EKLAFLQTAG LGKYSSEALL VNFTALVVLL LGASVVLYVT APAQSEHRLG YSSVRSPDS
101: TLRRAVLPWH VRAGLVVYVL ALLAAELGFL EKLAFLQTAG LGKYSSEALL VNFTALVVLL LGASVVLYVT APAQSEHRLG YSSVRSPDS
001: MGSVDPSRLS LVLFARLSGL VVAVSVLYWA LFLPNLGLSY STLHPLLMVI GFILVSGEAI LIHRWLPGSR KTKKAVHLWL QGMALASAVF GIWTKFHYQR
101: GVFANFYSLH SWMGLLSVSL FAAQWVTGFM SFWHRGEVRT TRTTFLPWHV FLGLYTYGLA IATAETGLLE KLTFLQTKRN VPRRGSESMT VNGLGLGLAL
201: LGCIVITAAI LPKYQSHSRD EKLVYSSQDR PKCLSS
101: GVFANFYSLH SWMGLLSVSL FAAQWVTGFM SFWHRGEVRT TRTTFLPWHV FLGLYTYGLA IATAETGLLE KLTFLQTKRN VPRRGSESMT VNGLGLGLAL
201: LGCIVITAAI LPKYQSHSRD EKLVYSSQDR PKCLSS
Arabidopsis Description
CYB561DProbable transmembrane ascorbate ferrireductase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C540]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.