CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011008.1-P	Field mustard	extracellular, golgi, plasma membrane	99.57	99.57
CDY55954	Canola	extracellular	98.71	98.71
AT1G26100.1	Thale cress	plasma membrane	87.55	86.44
CDY20529	Canola	plasma membrane	78.54	76.57
KRH75524	Soybean	extracellular, golgi, plasma membrane	66.95	65.82
KRH70628	Soybean	plasma membrane	66.09	63.64
Solyc05g009950.2.1	Tomato	plasma membrane	64.81	63.18
PGSC0003DMT400002104	Potato	plasma membrane	64.38	61.98
VIT_01s0011g02840.t01	Wine grape	plasma membrane	63.95	61.57
GSMUA_Achr8P29770_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	48.93	45.97
CDY01648	Canola	extracellular	38.63	39.13
CDX74514	Canola	extracellular	38.2	38.7
CDY50196	Canola	plasma membrane	32.62	32.34
CDY57373	Canola	plasma membrane	32.62	32.34
CDX92719	Canola	plasma membrane	32.62	32.34
CDX94439	Canola	extracellular	17.6	31.3
CDY27081	Canola	plasma membrane	27.47	27.47
CDY33743	Canola	plasma membrane	26.18	27.23
CDY41099	Canola	plasma membrane	26.18	27.23
CDY45283	Canola	plasma membrane	26.18	27.23
CDX81667	Canola	plasma membrane	25.75	26.79
CDX91626	Canola	plasma membrane	26.61	26.61

Protein Annotations

Gene3D:1.20.120.1770	MapMan:35.1	GO:A0A078HE72	UniProt:A0A078HE72	EnsemblPlants:CDY36092	ProteinID:CDY36092
ProteinID:CDY36092.1	InterPro:Cyt_b561/ferric_Rdtase_TM	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020
GO:GO:0016021	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00059927001	InterPro:IPR006593	PFAM:PF03188	PFscan:PS50939
PANTHER:PTHR10106	PANTHER:PTHR10106:SF20	SMART:SM00665	TMHMM:TMhelix	UniParc:UPI0004EEF1E9	SEG:seg

Description

BnaA08g19560DBnaA08g19560D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HE72]

Coordinates

chrLK032367:+:65736..67180

Molecular Weight (calculated)

25883.0 Da

IEP (calculated)

10.409

GRAVY (calculated)

0.487

Length

233 amino acids

Sequence
(BLAST)

001: MGSASLVLFA RLSGLVIAVL VVYWALLLVP HQGLTYSTLH PLLMVIGFIL VSGEAILIHR WLPGSRKTKK AVHLWLQGMA LVSAVFGIWT KFQYQSGVFS
101: NFYSLHSWMG LLSVSLFAAQ WVTGFMSFWH RGEVRTTRTT FLPWHVFLGL YTYGLAIATA ETGLLEKLTF LQTNKNVPRR CHESTIVNGL GLGLVLLSGV
201: VITAAILPKY QNSHSGNEKL VYSSQDRPKC LTS

Best Arabidopsis Sequence Match ( AT1G26100.1 )
(BLAST)

001: MGSVDPSRLS LVLFARLSGL VVAVSVLYWA LFLPNLGLSY STLHPLLMVI GFILVSGEAI LIHRWLPGSR KTKKAVHLWL QGMALASAVF GIWTKFHYQR
101: GVFANFYSLH SWMGLLSVSL FAAQWVTGFM SFWHRGEVRT TRTTFLPWHV FLGLYTYGLA IATAETGLLE KLTFLQTKRN VPRRGSESMT VNGLGLGLAL
201: LGCIVITAAI LPKYQSHSRD EKLVYSSQDR PKCLSS

Arabidopsis Description

CYB561DProbable transmembrane ascorbate ferrireductase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C540]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.