Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 6
- plasma membrane 8
- endoplasmic reticulum 5
- vacuole 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400002104 | Potato | plasma membrane | 97.49 | 96.28 |
| VIT_01s0011g02840.t01 | Wine grape | plasma membrane | 74.06 | 73.14 |
| KRH75524 | Soybean | extracellular, golgi, plasma membrane | 69.87 | 70.46 |
| KRH70628 | Soybean | plasma membrane | 71.13 | 70.25 |
| CDY36092 | Canola | extracellular | 63.18 | 64.81 |
| AT1G26100.1 | Thale cress | plasma membrane | 63.6 | 64.41 |
| Bra011008.1-P | Field mustard | extracellular, golgi, plasma membrane | 62.76 | 64.38 |
| CDY55954 | Canola | extracellular | 62.76 | 64.38 |
| CDY20529 | Canola | plasma membrane | 57.74 | 57.74 |
| GSMUA_Achr8P29770_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 49.37 | 47.58 |
| Solyc02g065580.2.1 | Tomato | plasma membrane | 41.0 | 42.24 |
| Solyc03g025840.2.1 | Tomato | plasma membrane | 35.98 | 37.23 |
| Solyc01g005140.2.1 | Tomato | plasma membrane | 30.96 | 33.48 |
| Solyc01g005150.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 27.62 | 29.46 |
Protein Annotations
| Gene3D:1.20.120.1770 | MapMan:35.1 | InterPro:Cyt_b561/ferric_Rdtase_TM | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0055114 |
| InterPro:IPR006593 | UniProt:K4BXG9 | PFAM:PF03188 | PFscan:PS50939 | PANTHER:PTHR10106 | PANTHER:PTHR10106:SF20 |
| SMART:SM00665 | EnsemblPlantsGene:Solyc05g009950.2 | EnsemblPlants:Solyc05g009950.2.1 | TMHMM:TMhelix | UniParc:UPI0002766E25 | SEG:seg |
Description
No Description!
Coordinates
chr5:-:4164685..4168099
Molecular Weight (calculated)
26614.1 Da
IEP (calculated)
9.971
GRAVY (calculated)
0.559
Length
239 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAHSFSLL VLARLSASIV AFLVLTWALY FKTSFYPHSS STQEEDLIYA VLHPLLMVIG FILISGEAIL VHRWLPGSRN LKKSVHLCLQ GLALACGVFG
101: IWTKFHSRDG IVTNFYSLHS WMGIICVSLF GAQWLMGFLS FWHRGEVRMT RIRILPWHVF LGLYTYGLAV ATAETGLLEK LTFLQTNGAV QKRCTESMIV
201: NGMGLSLALL SGMVIFAAVL PKHQTPHTKS VYSTNKLHS
101: IWTKFHSRDG IVTNFYSLHS WMGIICVSLF GAQWLMGFLS FWHRGEVRMT RIRILPWHVF LGLYTYGLAV ATAETGLLEK LTFLQTNGAV QKRCTESMIV
201: NGMGLSLALL SGMVIFAAVL PKHQTPHTKS VYSTNKLHS
001: MGSVDPSRLS LVLFARLSGL VVAVSVLYWA LFLPNLGLSY STLHPLLMVI GFILVSGEAI LIHRWLPGSR KTKKAVHLWL QGMALASAVF GIWTKFHYQR
101: GVFANFYSLH SWMGLLSVSL FAAQWVTGFM SFWHRGEVRT TRTTFLPWHV FLGLYTYGLA IATAETGLLE KLTFLQTKRN VPRRGSESMT VNGLGLGLAL
201: LGCIVITAAI LPKYQSHSRD EKLVYSSQDR PKCLSS
101: GVFANFYSLH SWMGLLSVSL FAAQWVTGFM SFWHRGEVRT TRTTFLPWHV FLGLYTYGLA IATAETGLLE KLTFLQTKRN VPRRGSESMT VNGLGLGLAL
201: LGCIVITAAI LPKYQSHSRD EKLVYSSQDR PKCLSS
Arabidopsis Description
CYB561DProbable transmembrane ascorbate ferrireductase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C540]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.