Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 7
- golgi 6
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY36092 | Canola | extracellular | 99.57 | 99.57 |
CDY55954 | Canola | extracellular | 99.14 | 99.14 |
AT1G26100.1 | Thale cress | plasma membrane | 87.55 | 86.44 |
KRH75524 | Soybean | extracellular, golgi, plasma membrane | 67.38 | 66.24 |
KRH70628 | Soybean | plasma membrane | 66.52 | 64.05 |
Solyc05g009950.2.1 | Tomato | plasma membrane | 64.38 | 62.76 |
VIT_01s0011g02840.t01 | Wine grape | plasma membrane | 64.38 | 61.98 |
PGSC0003DMT400002104 | Potato | plasma membrane | 63.95 | 61.57 |
GSMUA_Achr8P29770_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 48.93 | 45.97 |
Bra028195.1-P | Field mustard | extracellular, golgi, plasma membrane | 38.63 | 39.13 |
Bra019153.1-P | Field mustard | plasma membrane | 32.62 | 32.34 |
Bra022581.1-P | Field mustard | plasma membrane | 27.47 | 27.47 |
Bra026193.1-P | Field mustard | plasma membrane | 26.18 | 27.23 |
Bra026808.1-P | Field mustard | plasma membrane | 26.18 | 27.23 |
Protein Annotations
EnsemblPlants:Bra011008.1 | EnsemblPlants:Bra011008.1-P | EnsemblPlantsGene:Bra011008 | Gene3D:1.20.120.1770 | GO:GO:0005575 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055114 | InterPro:Cyt_b561/ferric_Rdtase_TM | InterPro:IPR006593 |
PANTHER:PTHR10106 | PANTHER:PTHR10106:SF20 | PFAM:PF03188 | PFscan:PS50939 | SEG:seg | SMART:SM00665 |
TMHMM:TMhelix | UniParc:UPI0002545E51 | UniProt:M4D3F4 | MapMan:35.1 | : | : |
Description
AT1G26100 (E=1e-097) | cytochrome B561 family protein
Coordinates
chrA08:-:17570312..17571694
Molecular Weight (calculated)
25869.0 Da
IEP (calculated)
10.409
GRAVY (calculated)
0.486
Length
233 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSASLVLFA RLSGLVIAVL VVYWALLLVP HQGLTYSTLH PLLMVIGFIL VSGEAILIHR WLPGSRKTKK AVHLWLQGMA LVSAVFGIWT KFQYQSGVFS
101: NFYSLHSWMG LLSVSLFAAQ WVTGFMSFWH RGEVRTTRTT FLPWHVFLGL YTYGLAIATA ETGLLEKLTF LQTNKNVPRR CHESTVVNGL GLGLVLLSGV
201: VITAAILPKY QNSHSGNEKL VYSSQDRPKC LTS
101: NFYSLHSWMG LLSVSLFAAQ WVTGFMSFWH RGEVRTTRTT FLPWHVFLGL YTYGLAIATA ETGLLEKLTF LQTNKNVPRR CHESTVVNGL GLGLVLLSGV
201: VITAAILPKY QNSHSGNEKL VYSSQDRPKC LTS
001: MGSVDPSRLS LVLFARLSGL VVAVSVLYWA LFLPNLGLSY STLHPLLMVI GFILVSGEAI LIHRWLPGSR KTKKAVHLWL QGMALASAVF GIWTKFHYQR
101: GVFANFYSLH SWMGLLSVSL FAAQWVTGFM SFWHRGEVRT TRTTFLPWHV FLGLYTYGLA IATAETGLLE KLTFLQTKRN VPRRGSESMT VNGLGLGLAL
201: LGCIVITAAI LPKYQSHSRD EKLVYSSQDR PKCLSS
101: GVFANFYSLH SWMGLLSVSL FAAQWVTGFM SFWHRGEVRT TRTTFLPWHV FLGLYTYGLA IATAETGLLE KLTFLQTKRN VPRRGSESMT VNGLGLGLAL
201: LGCIVITAAI LPKYQSHSRD EKLVYSSQDR PKCLSS
Arabidopsis Description
CYB561DProbable transmembrane ascorbate ferrireductase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C540]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.