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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 7
  • golgi 6
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY36092 Canola extracellular 99.57 99.57
CDY55954 Canola extracellular 99.14 99.14
AT1G26100.1 Thale cress plasma membrane 87.55 86.44
KRH75524 Soybean extracellular, golgi, plasma membrane 67.38 66.24
KRH70628 Soybean plasma membrane 66.52 64.05
Solyc05g009950.2.1 Tomato plasma membrane 64.38 62.76
VIT_01s0011g02840.t01 Wine grape plasma membrane 64.38 61.98
PGSC0003DMT400002104 Potato plasma membrane 63.95 61.57
GSMUA_Achr8P29770_001 Banana endoplasmic reticulum, extracellular, plasma membrane 48.93 45.97
Bra028195.1-P Field mustard extracellular, golgi, plasma membrane 38.63 39.13
Bra019153.1-P Field mustard plasma membrane 32.62 32.34
Bra022581.1-P Field mustard plasma membrane 27.47 27.47
Bra026193.1-P Field mustard plasma membrane 26.18 27.23
Bra026808.1-P Field mustard plasma membrane 26.18 27.23
Protein Annotations
EnsemblPlants:Bra011008.1EnsemblPlants:Bra011008.1-PEnsemblPlantsGene:Bra011008Gene3D:1.20.120.1770GO:GO:0005575GO:GO:0008150
GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0055114InterPro:Cyt_b561/ferric_Rdtase_TMInterPro:IPR006593
PANTHER:PTHR10106PANTHER:PTHR10106:SF20PFAM:PF03188PFscan:PS50939SEG:segSMART:SM00665
TMHMM:TMhelixUniParc:UPI0002545E51UniProt:M4D3F4MapMan:35.1::
Description
AT1G26100 (E=1e-097) | cytochrome B561 family protein
Coordinates
chrA08:-:17570312..17571694
Molecular Weight (calculated)
25869.0 Da
IEP (calculated)
10.409
GRAVY (calculated)
0.486
Length
233 amino acids
Sequence
(BLAST)
001: MGSASLVLFA RLSGLVIAVL VVYWALLLVP HQGLTYSTLH PLLMVIGFIL VSGEAILIHR WLPGSRKTKK AVHLWLQGMA LVSAVFGIWT KFQYQSGVFS
101: NFYSLHSWMG LLSVSLFAAQ WVTGFMSFWH RGEVRTTRTT FLPWHVFLGL YTYGLAIATA ETGLLEKLTF LQTNKNVPRR CHESTVVNGL GLGLVLLSGV
201: VITAAILPKY QNSHSGNEKL VYSSQDRPKC LTS
Best Arabidopsis Sequence Match ( AT1G26100.1 )
(BLAST)
001: MGSVDPSRLS LVLFARLSGL VVAVSVLYWA LFLPNLGLSY STLHPLLMVI GFILVSGEAI LIHRWLPGSR KTKKAVHLWL QGMALASAVF GIWTKFHYQR
101: GVFANFYSLH SWMGLLSVSL FAAQWVTGFM SFWHRGEVRT TRTTFLPWHV FLGLYTYGLA IATAETGLLE KLTFLQTKRN VPRRGSESMT VNGLGLGLAL
201: LGCIVITAAI LPKYQSHSRD EKLVYSSQDR PKCLSS
Arabidopsis Description
CYB561DProbable transmembrane ascorbate ferrireductase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C540]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.