Factsheet for TraesCS4D01G050300.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 2
extracellular 2
golgi 1
plasma membrane 3
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	extracellular, mitochondrion, plasma membrane
iPSORT:	mitochondrion
MultiLoc:	extracellular
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G049900.1	Wheat	plasma membrane	99.56	99.56
TraesCS4A01G264900.1	Wheat	plasma membrane	99.12	99.12
Os03t0717200-00	Rice	golgi, plasma membrane, vacuole	77.19	77.19
HORVU4Hr1G008200.8	Barley	cytosol, mitochondrion, plasma membrane	73.25	71.67
EER93563	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	70.61	71.24
Zm00001d033778_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	70.18	70.8
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid	50.44	52.27
KRH58610	Soybean	plasma membrane	43.42	46.7
Solyc01g005150.2.1	Tomato	endoplasmic reticulum, plasma membrane	43.86	44.64
KRH49716	Soybean	plasma membrane	41.67	44.6
CDY33743	Canola	plasma membrane	42.11	42.86
Bra026808.1-P	Field mustard	plasma membrane	42.11	42.86
PGSC0003DMT400058674	Potato	plasma membrane	28.51	42.76
CDX81667	Canola	plasma membrane	41.67	42.41
KRG89270	Soybean	plasma membrane	34.21	41.71
VIT_01s0011g06240.t01	Wine grape	plasma membrane	39.47	41.47
CDY41099	Canola	plasma membrane	40.35	41.07
CDY45283	Canola	plasma membrane	40.35	41.07
Bra026193.1-P	Field mustard	plasma membrane	39.91	40.62
AT1G14730.1	Thale cress	plasma membrane	39.91	40.62
KRH42515	Soybean	golgi, plasma membrane	39.04	40.27
TraesCS3D01G514800.1	Wheat	plasma membrane	38.16	39.01
TraesCS1D01G164200.1	Wheat	plasma membrane	39.04	38.7
TraesCS2D01G366100.1	Wheat	plasma membrane	39.04	37.4
TraesCS7D01G325600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	38.6	37.13
TraesCS6D01G219900.1	Wheat	plasma membrane	37.28	36.32
TraesCS7D01G286900.1	Wheat	plasma membrane	34.21	33.33

Protein Annotations

EnsemblPlants:TraesCS4D01G050300.1	EnsemblPlantsGene:TraesCS4D01G050300	Gene3D:1.20.120.1770	InterPro:Cyt_b561/ferric_Rdtase_TM	InterPro:IPR006593	PANTHER:PTHR10106
PANTHER:PTHR10106:SF36	PFAM:PF03188	PFscan:PS50939	SEG:seg	SMART:SM00665	TIGR:cd08766
TMHMM:TMhelix	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr4D:-:26205473..26206860

Molecular Weight (calculated)

24836.2 Da

IEP (calculated)

10.247

GRAVY (calculated)

0.911

Length

228 amino acids

Sequence
(BLAST)

001: MAIGGIIGGH HRHSVVASRV AMFAHLLFLT TAVLMLVWLL RFRGGINIQS DDPEQIFNVH PFVMTWGFIL LIGEAILVYT TIPMNHRAQK MVHMLVHLVA
101: FILGVFGIYA AFKFHNVAVV PDLVSLHSWI GIGAISLFAL QWLIGFAVFW MPGTHEHTRA AAAPVHVAGG LVIFLLAVCA AQTGLVQKSA SATPGTEARL
201: INVTGLFIVF YGVTVAATVM LRIATRYQ

Best Arabidopsis Sequence Match ( AT1G14730.1 )
(BLAST)

001: MNLSGDRTTL KRHSSLSTLV AHFFGILAVV LMLIWLLHYR EGIEYGSDNP LKVLNVHPFL MYCGFLFLVG QAMMTYKTAY ASHQVQKMVH GGLHLIGLVL
101: GIVGICAAFR FHDKVNLKDM VSLHSWIGLT TFILLGVQWL FGAFTFLAPQ SSSGTRTRMM PWHVLGGRAL LYMGIVAALT GLMQRATMLG QSTNAESRLI
201: NFLGLAILLF GVSVDFSVAL GRYN

Arabidopsis Description

CYB561CProbable transmembrane ascorbate ferrireductase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q67ZF6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.